I'm studying classification and regression. But I met some barriers that make me tired.
The first barrier is this:
I heard that the sigmoid function is used for binary classification and the softmax function is used for multi-class classification. I think the two functions are similar because their graphs are almost similar. But what features do make the sigmoid function used for binary classification and the softmax function used for multi-class classification?
The last barrier is this:
In Logistic regression, when sigmoid and softmax functions are used in each situation?
Related
I am going through a Binary Classification tutorial using PyTorch and here, the last layer of the network is torch.Linear() with just one neuron. (Makes Sense) which will give us a single neuron. as pred=network(input_batch)
After that the choice of Loss function is loss_fn=BCEWithLogitsLoss() (which is numerically stable than using the softmax first and then calculating loss) which will apply Softmax function to the output of last layer to give us a probability. so after that, it'll calculate the binary cross entropy to minimize the loss.
loss=loss_fn(pred,true)
My concern is that after all this, the author used torch.round(torch.sigmoid(pred))
Why would that be? I mean I know it'll get the prediction probabilities in the range [0,1] and then round of the values with default threshold of 0.5.
Isn't it better to use the sigmoid once after the last layer within the network rather using a softmax and a sigmoid at 2 different places given it's a binary classification??
Wouldn't it be better to just
out = self.linear(batch_tensor)
return self.sigmoid(out)
and then calculate the BCE loss and use the argmax() for checking accuracy??
I am just curious that can it be a valid strategy?
You seem to be thinking of the binary classification as a multi-class classification with two classes, but that is not quite correct when using the binary cross-entropy approach. Let's start by clarifying the goal of the binary classification before looking at any implementation details.
Technically, there are two classes, 0 and 1, but instead of considering them as two separate classes, you can see them as opposites of each other. For example, you want to classify whether a StackOverflow answer was helpful or not. The two classes would be "helpful" and "not helpful". Naturally, you would simply ask "Was the answer helpful?", the negative aspect is left off, and if that wasn't the case, you could deduce that it was "not helpful". (Remember, it's a binary case, there is no middle ground).
Therefore, your model only needs to predict a single class, but to avoid confusion with the actual two classes, that can be expressed as: The model predicts the probability that the positive case occurs. In context of the previous example: What is the probability that the StackOverflow answer was helpful?
Sigmoid gives you values in the range [0, 1], which are the probabilities. Now you need to decide when the model is confident enough for it to be positive by defining a threshold. To make it balanced, the threshold is 0.5, therefore as long as the probability is greater than 0.5 it is positive (class 1: "helpful") otherwise it's negative (class 0: "not helpful"), which is achieved by rounding (i.e. torch.round(torch.sigmoid(pred))).
After that the choice of Loss function is loss_fn=BCEWithLogitsLoss() (which is numerically stable than using the softmax first and then calculating loss) which will apply Softmax function to the output of last layer to give us a probability.
Isn't it better to use the sigmoid once after the last layer within the network rather using a softmax and a sigmoid at 2 different places given it's a binary classification??
BCEWithLogitsLoss applies Sigmoid not Softmax, there is no Softmax involved at all. From the nn.BCEWithLogitsLoss documentation:
This loss combines a Sigmoid layer and the BCELoss in one single class. This version is more numerically stable than using a plain Sigmoid followed by a BCELoss as, by combining the operations into one layer, we take advantage of the log-sum-exp trick for numerical stability.
By not applying Sigmoid in the model you get a more numerically stable version of the binary cross-entropy, but that means you have to apply the Sigmoid manually if you want to make an actual prediction outside of training.
[...] and use the argmax() for checking accuracy??
Again, you're thinking of the multi-class scenario. You only have a single output class, i.e. output has size [batch_size, 1]. Taking argmax of that, will always give you 0, because that is the only available class.
I am trying to implement a model for binary classification problem. Up to now, I was using softmax function (at the output layer) together with torch.NLLLoss function to calculate the loss. However, now I want to use the sigmoid function (instead of softmax) at the output layer. If I do that, should I also change the loss function (to BCELoss or binary_cross_entropy) or may I still use torch.NLLLoss function ?
If you use sigmoid function, then you can only do binary classification. It's not possible to do a multi-class classification. The reason for this is because sigmoid function always returns a value in the range between 0 and 1. So, for instance one can threshold the value at 0.5 and separate (or classify) it into two classes based on the obtained values.
Regarding the objective function NLLLoss - Negative Log Likelihood Loss. It just learns the data distribution. So, it's not a problem as long as that what you're trying to achieve during training.
I am reading following paper. And it uses EMA decay for variables.
Bidirectional Attention Flow for Machine Comprehension
During training, the moving averages of all weights of the model are
maintained with the exponential decay rate of 0.999.
They use TensorFlow and I found the related code of EMA.
https://github.com/allenai/bi-att-flow/blob/master/basic/model.py#L229
In PyTorch, how do I apply EMA to Variables?
Moving average is the key concept of momentum in gradient descent.
In PyTorch document you can find:
optimizer = torch.optim.SGD(model.parameters(), lr=0.1, momentum=0.9)
Change the parameter momentum to the value you want.
While defining prototxt in caffe, I found sometimes we use Softmax as the last layer type, sometimes we use SoftmaxWithLoss, I know the Softmax layer will return the probability the input data belongs to each class, but it seems that SoftmaxwithLoss will also return the class probability, then what's the difference between them? or did I misunderstand the usage of the two layer types?
While Softmax returns the probability of each target class given the model predictions, SoftmaxWithLoss not only applies the softmax operation to the predictions, but also computes the multinomial logistic loss, returned as output. This is fundamental for the training phase (without a loss there will be no gradient that can be used to update the network parameters).
See
SoftmaxWithLossLayer
and Caffe Loss
for more info.
After going through the Caffe tutorial here: http://caffe.berkeleyvision.org/gathered/examples/mnist.html
I am really confused about the different (and efficient) model using in this tutorial, which is defined here: https://github.com/BVLC/caffe/blob/master/examples/mnist/lenet_train_test.prototxt
As I understand, Convolutional layer in Caffe simply calculate the sum of Wx+b for each input, without applying any activation function. If we would like to add the activation function, we should add another layer immediately below that convolutional layer, like Sigmoid, Tanh, or Relu layer. Any paper/tutorial I read on the internet applies the activation function to the neuron units.
It leaves me a big question mark as we only can see the Convolutional layers and Pooling layers interleaving in the model. I hope someone can give me an explanation.
As a site note, another doubt for me is the max_iter in this solver:
https://github.com/BVLC/caffe/blob/master/examples/mnist/lenet_solver.prototxt
We have 60.000 images for training, 10.000 images for testing. So why does the max_iter here only 10.000 (and it still can get > 99% accuracy rate)? What does Caffe do in each iteration?
Actually, I'm not so sure if the accuracy rate is the total correct prediction/test size.
I'm very amazed of this example, as I haven't found any example, framework that can achieve this high accuracy rate in that very short time (only 5 mins to get >99% accuracy rate). Hence, I doubt there should be something I misunderstood.
Thanks.
Caffe uses batch processing. The max_iter is 10,000 because the batch_size is 64. No of epochs = (batch_size x max_iter)/No of train samples. So the number of epochs is nearly 10. The accuracy is calculated on the test data. And yes, the accuracy of the model is indeed >99% as the dataset is not very complicated.
For your question about the missing activation layers, you are correct. The model in the tutorial is missing activation layers. This seems to be an oversight of the tutorial. For the real LeNet-5 model, there should be activation functions following the convolution layers. For MNIST, the model still works surprisingly well without the additional activation layers.
For reference, in Le Cun's 2001 paper, it states:
As in classical neural networks, units in layers up to F6 compute a dot product between their input vector and their weight vector, to which a bias is added. This weighted sum, denoted a_i, for unit i, is then passed through a sigmoid squashing function to produce the state of unit i ...
F6 is the "blob" between the two fully connected layers. Hence the first fully connected layers should have an activation function applied (the tutorial uses ReLU activation functions instead of sigmoid).
MNIST is the hello world example for neural networks. It is very simple to today's standard. A single fully connected layer can solve the problem with accuracy of about 92%. Lenet-5 is a big improvement over this example.