Restore data from crashed MariaDB - mysql

Question

Need to retrieve a mysql dump from suddenly stopped database.
Database worked in kubernetes cluster as a bitnami/mariadb chart of version 6.7.4.
Was configured a slave and month ago it was stopped, but replication process was still in progress.
Database was crashed probably due to lack of disk space (because of huge binary logs )
I have a full snapshot of database data directory.
I have a full database schema, so I tried to install empty schema and replace all empty .idb files into same with data
After replacing and restarting mariadb I see an errors like that:
MariaDB [store]> select * from admin;
ERROR 1932 (42S02): Table 'store.admin' doesn't exist in engine
I ran mysql_upgrade but stil see same errors:
backend % mysql_upgrade -u store -p
Enter password:
Phase 1/7: Checking and upgrading mysql database
Processing databases
mysql
mysql.column_stats OK
mysql.columns_priv OK
mysql.db OK
mysql.event OK
mysql.func OK
mysql.global_priv OK
mysql.gtid_slave_pos OK
mysql.help_category OK
mysql.help_keyword OK
mysql.help_relation OK
mysql.help_topic OK
mysql.index_stats OK
mysql.innodb_index_stats OK
mysql.innodb_table_stats OK
mysql.plugin OK
mysql.proc OK
mysql.procs_priv OK
mysql.proxies_priv OK
mysql.roles_mapping OK
mysql.servers OK
mysql.table_stats OK
mysql.tables_priv OK
mysql.time_zone OK
mysql.time_zone_leap_second OK
mysql.time_zone_name OK
mysql.time_zone_transition OK
mysql.time_zone_transition_type OK
mysql.transaction_registry OK
Phase 2/7: Installing used storage engines... Skipped
Phase 3/7: Fixing views
mysql.user OK
sys.host_summary OK
sys.host_summary_by_file_io OK
sys.host_summary_by_file_io_type OK
sys.host_summary_by_stages OK
sys.host_summary_by_statement_latency OK
sys.host_summary_by_statement_type OK
sys.innodb_buffer_stats_by_schema OK
sys.innodb_buffer_stats_by_table OK
sys.innodb_lock_waits OK
sys.io_by_thread_by_latency OK
sys.io_global_by_file_by_bytes OK
sys.io_global_by_file_by_latency OK
sys.io_global_by_wait_by_bytes OK
sys.io_global_by_wait_by_latency OK
sys.latest_file_io OK
sys.memory_by_host_by_current_bytes OK
sys.memory_by_thread_by_current_bytes OK
sys.memory_by_user_by_current_bytes OK
sys.memory_global_by_current_bytes OK
sys.memory_global_total OK
sys.metrics OK
sys.processlist OK
sys.ps_check_lost_instrumentation OK
sys.schema_auto_increment_columns OK
sys.schema_index_statistics OK
sys.schema_object_overview OK
sys.schema_redundant_indexes OK
sys.schema_table_lock_waits OK
sys.schema_table_statistics OK
sys.schema_table_statistics_with_buffer OK
sys.schema_tables_with_full_table_scans OK
sys.schema_unused_indexes OK
sys.session OK
sys.session_ssl_status OK
sys.statement_analysis OK
sys.statements_with_errors_or_warnings OK
sys.statements_with_full_table_scans OK
sys.statements_with_runtimes_in_95th_percentile OK
sys.statements_with_sorting OK
sys.statements_with_temp_tables OK
sys.user_summary OK
sys.user_summary_by_file_io OK
sys.user_summary_by_file_io_type OK
sys.user_summary_by_stages OK
sys.user_summary_by_statement_latency OK
sys.user_summary_by_statement_type OK
sys.version OK
sys.wait_classes_global_by_avg_latency OK
sys.wait_classes_global_by_latency OK
sys.waits_by_host_by_latency OK
sys.waits_by_user_by_latency OK
sys.waits_global_by_latency OK
sys.x$host_summary OK
sys.x$host_summary_by_file_io OK
sys.x$host_summary_by_file_io_type OK
sys.x$host_summary_by_stages OK
sys.x$host_summary_by_statement_latency OK
sys.x$host_summary_by_statement_type OK
sys.x$innodb_buffer_stats_by_schema OK
sys.x$innodb_buffer_stats_by_table OK
sys.x$innodb_lock_waits OK
sys.x$io_by_thread_by_latency OK
sys.x$io_global_by_file_by_bytes OK
sys.x$io_global_by_file_by_latency OK
sys.x$io_global_by_wait_by_bytes OK
sys.x$io_global_by_wait_by_latency OK
sys.x$latest_file_io OK
sys.x$memory_by_host_by_current_bytes OK
sys.x$memory_by_thread_by_current_bytes OK
sys.x$memory_by_user_by_current_bytes OK
sys.x$memory_global_by_current_bytes OK
sys.x$memory_global_total OK
sys.x$processlist OK
sys.x$ps_digest_95th_percentile_by_avg_us OK
sys.x$ps_digest_avg_latency_distribution OK
sys.x$ps_schema_table_statistics_io OK
sys.x$schema_flattened_keys OK
sys.x$schema_index_statistics OK
sys.x$schema_table_lock_waits OK
sys.x$schema_table_statistics OK
sys.x$schema_table_statistics_with_buffer OK
sys.x$schema_tables_with_full_table_scans OK
sys.x$session OK
sys.x$statement_analysis OK
sys.x$statements_with_errors_or_warnings OK
sys.x$statements_with_full_table_scans OK
sys.x$statements_with_runtimes_in_95th_percentile OK
sys.x$statements_with_sorting OK
sys.x$statements_with_temp_tables OK
sys.x$user_summary OK
sys.x$user_summary_by_file_io OK
sys.x$user_summary_by_file_io_type OK
sys.x$user_summary_by_stages OK
sys.x$user_summary_by_statement_latency OK
sys.x$user_summary_by_statement_type OK
sys.x$wait_classes_global_by_avg_latency OK
sys.x$wait_classes_global_by_latency OK
sys.x$waits_by_host_by_latency OK
sys.x$waits_by_user_by_latency OK
sys.x$waits_global_by_latency OK
Phase 4/7: Running 'mysql_fix_privilege_tables'
Phase 5/7: Fixing table and database names
Phase 6/7: Checking and upgrading tables
Processing databases
information_schema
performance_schema
store
store.account
Error : Table 'store.account' doesn't exist in engine
status : Operation failed
store.account_event
Error : Table 'store.account_event' doesn't exist in engine
status : Operation failed
store.account_setting
Error : Table 'store.account_setting' doesn't exist in engine
status : Operation failed
store.admin
Error : Table 'store.admin' doesn't exist in engine
status : Operation failed
store.aggregated_actions_daily
Error : Table 'store.aggregated_actions_daily' doesn't exist in engine
status : Operation failed
store.aggregated_report_daily
Error : Table 'store.aggregated_report_daily' doesn't exist in engine
status : Operation failed
store.aggregated_report_daily_total
Error : Table 'store.aggregated_report_daily_total' doesn't exist in engine
status : Operation failed
store.aggregated_report_monthly
Error : Table 'store.aggregated_report_monthly' doesn't exist in engine
status : Operation failed
store.aggregated_report_weekly
Error : Table 'store.aggregated_report_weekly' doesn't exist in engine
status : Operation failed
store.aggregated_trainer
Error : Table 'store.aggregated_trainer' doesn't exist in engine
status : Operation failed
store.apple_price
Error : Table 'store.apple_price' doesn't exist in engine
status : Operation failed
store.apple_tier_price
Error : Table 'store.apple_tier_price' doesn't exist in engine
status : Operation failed
store.country
Error : Table 'store.country' doesn't exist in engine
status : Operation failed
store.course
Error : Table 'store.course' doesn't exist in engine
status : Operation failed
store.course_container
Error : Table 'store.course_container' doesn't exist in engine
status : Operation failed
store.course_container_course_dietary_program
Error : Table 'store.course_container_course_dietary_program' doesn't exist in engine
status : Operation failed
store.course_container_course_education_program
Error : Table 'store.course_container_course_education_program' doesn't exist in engine
status : Operation failed
store.course_container_course_workout_program
Error : Table 'store.course_container_course_workout_program' doesn't exist in engine
status : Operation failed
store.course_day
Error : Table 'store.course_day' doesn't exist in engine
status : Operation failed
store.course_dietary_program
Error : Table 'store.course_dietary_program' doesn't exist in engine
status : Operation failed
store.course_education_program
Error : Table 'store.course_education_program' doesn't exist in engine
status : Operation failed
store.course_price
Error : Table 'store.course_price' doesn't exist in engine
status : Operation failed
store.course_workout_program
Error : Table 'store.course_workout_program' doesn't exist in engine
status : Operation failed
store.credit_card
Error : Table 'store.credit_card' doesn't exist in engine
status : Operation failed
store.currency_rate
Error : Table 'store.currency_rate' doesn't exist in engine
status : Operation failed
store.daily_nutrition
Error : Table 'store.daily_nutrition' doesn't exist in engine
status : Operation failed
store.daily_recipe
Error : Table 'store.daily_recipe' doesn't exist in engine
status : Operation failed
store.diet
Error : Table 'store.diet' doesn't exist in engine
status : Operation failed
store.diet_recipe
Error : Table 'store.diet_recipe' doesn't exist in engine
status : Operation failed
store.dietary_program
Error : Table 'store.dietary_program' doesn't exist in engine
status : Operation failed
store.dietary_program_day
Error : Table 'store.dietary_program_day' doesn't exist in engine
status : Operation failed
store.education_program
Error : Table 'store.education_program' doesn't exist in engine
status : Operation failed
store.education_program_day
Error : Table 'store.education_program_day' doesn't exist in engine
status : Operation failed
store.exercise
Error : Table 'store.exercise' doesn't exist in engine
status : Operation failed
store.exercise_step
Error : Table 'store.exercise_step' doesn't exist in engine
status : Operation failed
store.file
Error : Table 'store.file' doesn't exist in engine
status : Operation failed
store.food
Error : Table 'store.food' doesn't exist in engine
status : Operation failed
store.food_copy
Error : Table 'store.food_copy' doesn't exist in engine
status : Operation failed
store.lesson
Error : Table 'store.lesson' doesn't exist in engine
status : Operation failed
store.lesson_pack
Error : Table 'store.lesson_pack' doesn't exist in engine
status : Operation failed
store.lesson_pack_lesson
Error : Table 'store.lesson_pack_lesson' doesn't exist in engine
status : Operation failed
store.marathon
Error : Table 'store.marathon' doesn't exist in engine
status : Operation failed
store.marathon_day
Error : Table 'store.marathon_day' doesn't exist in engine
status : Operation failed
store.note
Error : Table 'store.note' doesn't exist in engine
status : Operation failed
store.nutrition
Error : Table 'store.nutrition' doesn't exist in engine
status : Operation failed
store.nutrition_recipe
Error : Table 'store.nutrition_recipe' doesn't exist in engine
status : Operation failed
store.payment_intention
Error : Table 'store.payment_intention' doesn't exist in engine
status : Operation failed
store.payment_transaction
Error : Table 'store.payment_transaction' doesn't exist in engine
status : Operation failed
store.payment_transaction_apple_in_app
Error : Table 'store.payment_transaction_apple_in_app' doesn't exist in engine
status : Operation failed
store.payment_transaction_bt
Error : Table 'store.payment_transaction_bt' doesn't exist in engine
status : Operation failed
store.payment_transaction_cp
Error : Table 'store.payment_transaction_cp' doesn't exist in engine
status : Operation failed
store.payment_transaction_ym
Error : Table 'store.payment_transaction_ym' doesn't exist in engine
status : Operation failed
store.payout_transaction
Error : Table 'store.payout_transaction' doesn't exist in engine
status : Operation failed
store.payout_transaction_payment_transaction
Error : Table 'store.payout_transaction_payment_transaction' doesn't exist in engine
status : Operation failed
store.phone_verification
Error : Table 'store.phone_verification' doesn't exist in engine
status : Operation failed
store.product
Error : Table 'store.product' doesn't exist in engine
status : Operation failed
store.recipe
Error : Table 'store.recipe' doesn't exist in engine
status : Operation failed
store.recipe_food
Error : Table 'store.recipe_food' doesn't exist in engine
status : Operation failed
store.recipe_step
Error : Table 'store.recipe_step' doesn't exist in engine
status : Operation failed
store.sales_order
Error : Table 'store.sales_order' doesn't exist in engine
status : Operation failed
store.sales_order_item
Error : Table 'store.sales_order_item' doesn't exist in engine
status : Operation failed
store.time_slot
Error : Table 'store.time_slot' doesn't exist in engine
status : Operation failed
store.top_group_product
Error : Table 'store.top_group_product' doesn't exist in engine
status : Operation failed
store.top_home_product
Error : Table 'store.top_home_product' doesn't exist in engine
status : Operation failed
store.top_month_product
Error : Table 'store.top_month_product' doesn't exist in engine
status : Operation failed
store.top_product
Error : Table 'store.top_product' doesn't exist in engine
status : Operation failed
store.top_trainer
Error : Table 'store.top_trainer' doesn't exist in engine
status : Operation failed
store.trainer
Error : Table 'store.trainer' doesn't exist in engine
status : Operation failed
store.trainer_action
Error : Table 'store.trainer_action' doesn't exist in engine
status : Operation failed
store.trainer_chat_link
Error : Table 'store.trainer_chat_link' doesn't exist in engine
status : Operation failed
store.trainer_event
Error : Table 'store.trainer_event' doesn't exist in engine
status : Operation failed
store.trainer_event_message OK
store.trainer_notification_task
Error : Table 'store.trainer_notification_task' doesn't exist in engine
status : Operation failed
store.trainer_payout_info
Error : Table 'store.trainer_payout_info' doesn't exist in engine
status : Operation failed
store.trainer_status_message
Error : Table 'store.trainer_status_message' doesn't exist in engine
status : Operation failed
store.training
Error : Table 'store.training' doesn't exist in engine
status : Operation failed
store.training_exercise
Error : Table 'store.training_exercise' doesn't exist in engine
status : Operation failed
store.user
Error : Table 'store.user' doesn't exist in engine
status : Operation failed
store.user_course
Error : Table 'store.user_course' doesn't exist in engine
status : Operation failed
store.user_course_job
Error : Table 'store.user_course_job' doesn't exist in engine
status : Operation failed
store.user_device
Error : Table 'store.user_device' doesn't exist in engine
status : Operation failed
store.user_measurement_activity
Error : Table 'store.user_measurement_activity' doesn't exist in engine
status : Operation failed
store.user_measurement_belly
Error : Table 'store.user_measurement_belly' doesn't exist in engine
status : Operation failed
store.user_measurement_biceps
Error : Table 'store.user_measurement_biceps' doesn't exist in engine
status : Operation failed
store.user_measurement_bust
Error : Table 'store.user_measurement_bust' doesn't exist in engine
status : Operation failed
store.user_measurement_calf
Error : Table 'store.user_measurement_calf' doesn't exist in engine
status : Operation failed
store.user_measurement_gender
Error : Table 'store.user_measurement_gender' doesn't exist in engine
status : Operation failed
store.user_measurement_height
Error : Table 'store.user_measurement_height' doesn't exist in engine
status : Operation failed
store.user_measurement_hips
Error : Table 'store.user_measurement_hips' doesn't exist in engine
status : Operation failed
store.user_measurement_lactation
Error : Table 'store.user_measurement_lactation' doesn't exist in engine
status : Operation failed
store.user_measurement_neck
Error : Table 'store.user_measurement_neck' doesn't exist in engine
status : Operation failed
store.user_measurement_single_hip
Error : Table 'store.user_measurement_single_hip' doesn't exist in engine
status : Operation failed
store.user_measurement_waist
Error : Table 'store.user_measurement_waist' doesn't exist in engine
status : Operation failed
store.user_measurement_weight
Error : Table 'store.user_measurement_weight' doesn't exist in engine
status : Operation failed
store.user_product
Error : Table 'store.user_product' doesn't exist in engine
status : Operation failed
store.user_progress_report
Error : Table 'store.user_progress_report' doesn't exist in engine
status : Operation failed
store.user_progress_report_request
Error : Table 'store.user_progress_report_request' doesn't exist in engine
status : Operation failed
store.user_trainer
Error : Table 'store.user_trainer' doesn't exist in engine
status : Operation failed
store.user_trainer_referrer
Error : Table 'store.user_trainer_referrer' doesn't exist in engine
status : Operation failed
store.video
Error : Table 'store.video' doesn't exist in engine
status : Operation failed
store.workout_program
Error : Table 'store.workout_program' doesn't exist in engine
status : Operation failed
store.workout_program_day
Error : Table 'store.workout_program_day' doesn't exist in engine
status : Operation failed
sys
sys.sys_config OK
test
Repairing tables
store.account
Error : Table 'store.account' doesn't exist in engine
status : Operation failed
store.account_event
Error : Table 'store.account_event' doesn't exist in engine
status : Operation failed
store.account_setting
Error : Table 'store.account_setting' doesn't exist in engine
status : Operation failed
store.admin
Error : Table 'store.admin' doesn't exist in engine
status : Operation failed
store.aggregated_actions_daily
Error : Table 'store.aggregated_actions_daily' doesn't exist in engine
status : Operation failed
store.aggregated_report_daily
Error : Table 'store.aggregated_report_daily' doesn't exist in engine
status : Operation failed
store.aggregated_report_daily_total
Error : Table 'store.aggregated_report_daily_total' doesn't exist in engine
status : Operation failed
store.aggregated_report_monthly
Error : Table 'store.aggregated_report_monthly' doesn't exist in engine
status : Operation failed
store.aggregated_report_weekly
Error : Table 'store.aggregated_report_weekly' doesn't exist in engine
status : Operation failed
store.aggregated_trainer
Error : Table 'store.aggregated_trainer' doesn't exist in engine
status : Operation failed
store.apple_price
Error : Table 'store.apple_price' doesn't exist in engine
status : Operation failed
store.apple_tier_price
Error : Table 'store.apple_tier_price' doesn't exist in engine
status : Operation failed
store.country
Error : Table 'store.country' doesn't exist in engine
status : Operation failed
store.course
Error : Table 'store.course' doesn't exist in engine
status : Operation failed
store.course_container
Error : Table 'store.course_container' doesn't exist in engine
status : Operation failed
store.course_container_course_dietary_program
Error : Table 'store.course_container_course_dietary_program' doesn't exist in engine
status : Operation failed
store.course_container_course_education_program
Error : Table 'store.course_container_course_education_program' doesn't exist in engine
status : Operation failed
store.course_container_course_workout_program
Error : Table 'store.course_container_course_workout_program' doesn't exist in engine
status : Operation failed
store.course_day
Error : Table 'store.payout_transaction_payment_transaction' doesn't exist in engine
status : Operation failed
store.phone_verification
Error : Table 'store.phone_verification' doesn't exist in engine
status : Operation failed
store.product
Error : Table 'store.product' doesn't exist in engine
status : Operation failed
store.recipe
Error : Table 'store.recipe' doesn't exist in engine
status : Operation failed
store.recipe_food
Error : Table 'store.recipe_food' doesn't exist in engine
status : Operation failed
store.recipe_step
Error : Table 'store.recipe_step' doesn't exist in engine
status : Operation failed
store.sales_order
Error : Table 'store.sales_order' doesn't exist in engine
status : Operation failed
store.sales_order_item
Error : Table 'store.sales_order_item' doesn't exist in engine
status : Operation failed
store.time_slot
Error : Table 'store.time_slot' doesn't exist in engine
status : Operation failed
store.top_group_product
Error : Table 'store.top_group_product' doesn't exist in engine
status : Operation failed
store.top_home_product
Error : Table 'store.top_home_product' doesn't exist in engine
status : Operation failed
store.top_month_product
Error : Table 'store.top_month_product' doesn't exist in engine
status : Operation failed
store.top_product
Error : Table 'store.workout_program_day' doesn't exist in engine
status : Operation failed
Phase 7/7: Running 'FLUSH PRIVILEGES'
OK
Is there any way to restore this data?
Thanks in advance!