I just finished testing the entire thing on my virtual machine environment and now I am trying to launch it on the dedicated server. And now I ran into a completely new issue. First I confirmed that I have both context Broker and centos running (on 1026 and 5050 respectively):
[root#centos conf]# netstat -ntlpd
Active Internet connections (only servers)
Proto Recv-Q Send-Q Local Address Foreign Address State PID/Program name
tcp 0 0 0.0.0.0:1026 0.0.0.0:* LISTEN 1321/contextBroker
tcp 0 0 127.0.0.1:27017 0.0.0.0:* LISTEN 1282/mongod
tcp 0 0 0.0.0.0:3306 0.0.0.0:* LISTEN 1791/mysqld
tcp 0 0 0.0.0.0:22 0.0.0.0:* LISTEN 1260/sshd
tcp 0 0 :::1026 :::* LISTEN 1321/contextBroker
tcp 0 0 :::8081 :::* LISTEN 2481/java
tcp 0 0 :::22 :::* LISTEN 1260/sshd
tcp 0 0 :::5050 :::* LISTEN 2481/java
[root#centos conf]# service cygnus status
Cygnus 1 status...
cygnus-flume-ng (pid 2481) is running...
Then I confirmed that I have data on contextBroker because this command gave me an appropriate response:
(curl localhost:1026/v1/queryContext -s -S --header 'Content-Type: application/json' \
--header 'Accept: application/json' -d #- | python -mjson.tool) <<EOF
{
"entities": [
{
"type": "Room",
"isPattern": "false",
"id": "Room1"
}
]
}
EOF
Following the workaround to an issue with root user and logging I fixed the log4j.properties and changed the follwing:
flume.log.dir=/var/log/cygnus
I then started cygnus and got the following log:
Starting an ordered shutdown of Cygnus
Stopping sources
Stopping http-source (lyfecycle state=START)
All the channels are empty
Stopping channels
Stopping mysql-channel (lyfecycle state=START)
Stopping sinks
Stopping mysql-sink (lyfecycle state=START)
Info: Sourcing environment configuration script /usr/cygnus/conf/flume-env.sh
Warning: JAVA_HOME is not set!
+ exec /usr/bin/java -Xmx20m -Dflume.log.file=cygnus.log -cp '/usr/cygnus/conf:/usr/cygnus/lib/*:/usr/cygnus/plugins.d/cygnus/lib/*:/usr/cygnus/plugins.d/cygnus/libext/*' -Djava.library.path= com.telefonica.iot.cygnus.nodes.CygnusApplic$
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/usr/cygnus/lib/slf4j-log4j12-1.6.1.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/usr/cygnus/plugins.d/cygnus/lib/cygnus-0.11.0-jar-with-dependencies.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
17 Dec 2015 13:35:37,684 INFO [main] (com.telefonica.iot.cygnus.nodes.CygnusApplication.main:235) - Starting a Jetty server listening on port 8081 (Management Interface)
17 Dec 2015 13:35:37,700 INFO [main] (org.mortbay.log.Slf4jLog.info:67) - Logging to org.slf4j.impl.Log4jLoggerAdapter(org.mortbay.log) via org.mortbay.log.Slf4jLog
17 Dec 2015 13:35:37,700 INFO [main] (com.telefonica.iot.cygnus.nodes.CygnusApplication.main:238) - Starting Cygnus application
17 Dec 2015 13:35:37,700 INFO [Thread-1] (org.mortbay.log.Slf4jLog.info:67) - jetty-6.1.26
17 Dec 2015 13:35:37,713 INFO [lifecycleSupervisor-1-0] (org.apache.flume.node.PollingPropertiesFileConfigurationProvider.start:61) - Configuration provider starting
17 Dec 2015 13:35:37,715 INFO [conf-file-poller-0] (org.apache.flume.node.PollingPropertiesFileConfigurationProvider$FileWatcherRunnable.run:133) - Reloading configuration file:/usr/cygnus/conf/agent_1.conf
17 Dec 2015 13:35:37,725 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
17 Dec 2015 13:35:37,725 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
17 Dec 2015 13:35:37,725 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
17 Dec 2015 13:35:37,755 INFO [Thread-1] (org.mortbay.log.Slf4jLog.info:67) - Started SocketConnector#0.0.0.0:8081
17 Dec 2015 13:35:37,764 WARN [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.isValid:319) - Agent configuration for 'cygunsagent' does not contain any channels. Marking it as invalid.
17 Dec 2015 13:35:37,765 WARN [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration.validateConfiguration:127) - Agent configuration invalid for agent 'cygunsagent'. It will be removed.
17 Dec 2015 13:35:37,766 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration.validateConfiguration:140) - Post-validation flume configuration contains configuration for agents: [cygnusagent]
17 Dec 2015 13:35:37,766 INFO [conf-file-poller-0] (org.apache.flume.node.AbstractConfigurationProvider.loadChannels:150) - Creating channels
17 Dec 2015 13:35:37,778 INFO [conf-file-poller-0] (org.apache.flume.channel.DefaultChannelFactory.create:40) - Creating instance of channel mysql-channel type memory
17 Dec 2015 13:35:37,782 INFO [conf-file-poller-0] (org.apache.flume.node.AbstractConfigurationProvider.loadChannels:205) - Created channel mysql-channel
17 Dec 2015 13:35:37,783 INFO [conf-file-poller-0] (org.apache.flume.source.DefaultSourceFactory.create:39) - Creating instance of source http-source, type org.apache.flume.source.http.HTTPSource
17 Dec 2015 13:35:37,791 INFO [conf-file-poller-0] (com.telefonica.iot.cygnus.handlers.OrionRestHandler.<init>:75) - Cygnus version (0.11.0.2a9c87fb7fd6156225e2eed7fbc9792f1d9c5dfe)
17 Dec 2015 13:35:37,807 INFO [conf-file-poller-0] (com.telefonica.iot.cygnus.handlers.OrionRestHandler.configure:141) - Startup completed
17 Dec 2015 13:35:37,826 INFO [conf-file-poller-0] (org.apache.flume.sink.DefaultSinkFactory.create:40) - Creating instance of sink: mysql-sink, type: com.telefonica.iot.cygnus.sinks.OrionMySQLSink
17 Dec 2015 13:35:37,839 INFO [conf-file-poller-0] (org.apache.flume.node.AbstractConfigurationProvider.getConfiguration:119) - Channel mysql-channel connected to [http-source, mysql-sink]
17 Dec 2015 13:35:37,843 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:138) - Starting new configuration:{ sourceRunners:{http-source=EventDrivenSourceRunner: { source:org.apache.flume.source.http.HTT$
17 Dec 2015 13:35:37,844 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:145) - Starting Channel mysql-channel
17 Dec 2015 13:35:37,910 INFO [lifecycleSupervisor-1-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.register:110) - Monitoried counter group for type: CHANNEL, name: mysql-channel, registered successfully.
17 Dec 2015 13:35:37,910 INFO [lifecycleSupervisor-1-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.start:94) - Component type: CHANNEL, name: mysql-channel started
17 Dec 2015 13:35:37,911 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:173) - Starting Sink mysql-sink
17 Dec 2015 13:35:37,913 INFO [lifecycleSupervisor-1-1] (com.telefonica.iot.cygnus.sinks.OrionMySQLSink.start:153) - [mysql-sink] Startup completed
17 Dec 2015 13:35:37,915 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:184) - Starting Source http-source
17 Dec 2015 13:35:37,916 INFO [lifecycleSupervisor-1-2] (com.telefonica.iot.cygnus.interceptors.GroupingInterceptor.initialize:92) - Grouping rules read:
17 Dec 2015 13:35:37,916 INFO [conf-file-poller-0] (org.apache.flume.node.Application.stopAllComponents:101) - Shutting down configuration: { sourceRunners:{http-source=EventDrivenSourceRunner: { source:org.apache.flume.source.http.HT$
17 Dec 2015 13:35:37,917 INFO [conf-file-poller-0] (org.apache.flume.node.Application.stopAllComponents:105) - Stopping Source http-source
17 Dec 2015 13:35:37,920 ERROR [lifecycleSupervisor-1-2] (com.telefonica.iot.cygnus.interceptors.GroupingInterceptor.parseGroupingRules:165) - Error while parsing the Json-based grouping rules file. Details=null
17 Dec 2015 13:35:37,921 WARN [lifecycleSupervisor-1-2] (com.telefonica.iot.cygnus.interceptors.GroupingInterceptor.initialize:98) - Grouping rules syntax has errors
17 Dec 2015 13:35:37,948 INFO [lifecycleSupervisor-1-2] (org.mortbay.log.Slf4jLog.info:67) - jetty-6.1.26
17 Dec 2015 13:35:37,973 INFO [lifecycleSupervisor-1-2] (org.mortbay.log.Slf4jLog.info:67) - Started SocketConnector#0.0.0.0:5050
17 Dec 2015 13:35:37,974 INFO [lifecycleSupervisor-1-2] (org.apache.flume.instrumentation.MonitoredCounterGroup.register:110) - Monitoried counter group for type: SOURCE, name: http-source, registered successfully.
17 Dec 2015 13:35:37,974 INFO [lifecycleSupervisor-1-2] (org.apache.flume.instrumentation.MonitoredCounterGroup.start:94) - Component type: SOURCE, name: http-source started
17 Dec 2015 13:35:37,974 INFO [conf-file-poller-0] (org.apache.flume.lifecycle.LifecycleSupervisor.unsupervise:171) - Stopping component: EventDrivenSourceRunner: { source:org.apache.flume.source.http.HTTPSource{name:http-source,state$
17 Dec 2015 13:35:37,974 INFO [conf-file-poller-0] (org.mortbay.log.Slf4jLog.info:67) - Stopped SocketConnector#0.0.0.0:5050
17 Dec 2015 13:35:37,975 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:139) - Component type: SOURCE, name: http-source stopped
17 Dec 2015 13:35:37,976 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:145) - Shutdown Metric for type: SOURCE, name: http-source. source.start.time == 1450355737974
17 Dec 2015 13:35:37,976 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:151) - Shutdown Metric for type: SOURCE, name: http-source. source.stop.time == 1450355737975
17 Dec 2015 13:35:37,976 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.append-batch.accepted == 0
17 Dec 2015 13:35:37,976 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.append-batch.received == 0
17 Dec 2015 13:35:37,976 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.append.accepted == 0
17 Dec 2015 13:35:37,976 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.append.received == 0
17 Dec 2015 13:35:37,977 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.events.accepted == 0
17 Dec 2015 13:35:37,977 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.events.received == 0
17 Dec 2015 13:35:37,977 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: SOURCE, name: http-source. src.open-connection.count == 0
17 Dec 2015 13:35:37,977 INFO [conf-file-poller-0] (org.apache.flume.source.http.HTTPSource.stop:172) - Http source http-source stopped. Metrics: SOURCE:http-source{src.events.accepted=0, src.open-connection.count=0, src.append.receiv$
17 Dec 2015 13:35:37,977 INFO [conf-file-poller-0] (org.apache.flume.node.Application.stopAllComponents:115) - Stopping Sink mysql-sink
17 Dec 2015 13:35:37,977 INFO [conf-file-poller-0] (org.apache.flume.lifecycle.LifecycleSupervisor.unsupervise:171) - Stopping component: SinkRunner: { policy:org.apache.flume.sink.DefaultSinkProcessor#76da521f counterGroup:{ name:nul$
17 Dec 2015 13:35:37,987 INFO [conf-file-poller-0] (org.apache.flume.node.Application.stopAllComponents:125) - Stopping Channel mysql-channel
17 Dec 2015 13:35:37,987 INFO [conf-file-poller-0] (org.apache.flume.lifecycle.LifecycleSupervisor.unsupervise:171) - Stopping component: org.apache.flume.channel.MemoryChannel{name: mysql-channel}
17 Dec 2015 13:35:37,987 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:139) - Component type: CHANNEL, name: mysql-channel stopped
17 Dec 2015 13:35:37,987 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:145) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.start.time == 1450355737910
17 Dec 2015 13:35:37,988 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:151) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.stop.time == 1450355737987
17 Dec 2015 13:35:37,988 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.capacity == 1000
17 Dec 2015 13:35:37,988 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.current.size == 0
17 Dec 2015 13:35:37,988 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.event.put.attempt == 0
17 Dec 2015 13:35:37,988 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.event.put.success == 0
17 Dec 2015 13:35:37,988 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.event.take.attempt == 1
17 Dec 2015 13:35:37,989 INFO [conf-file-poller-0] (org.apache.flume.instrumentation.MonitoredCounterGroup.stop:167) - Shutdown Metric for type: CHANNEL, name: mysql-channel. channel.event.take.success == 0
17 Dec 2015 13:35:37,989 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:138) - Starting new configuration:{ sourceRunners:{http-source=EventDrivenSourceRunner: { source:org.apache.flume.source.http.HTT$
17 Dec 2015 13:35:37,989 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:145) - Starting Channel mysql-channel
17 Dec 2015 13:35:37,989 INFO [lifecycleSupervisor-1-3] (org.apache.flume.instrumentation.MonitoredCounterGroup.start:94) - Component type: CHANNEL, name: mysql-channel started
17 Dec 2015 13:35:37,992 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:173) - Starting Sink mysql-sink
17 Dec 2015 13:35:37,993 INFO [lifecycleSupervisor-1-8] (com.telefonica.iot.cygnus.sinks.OrionMySQLSink.start:153) - [mysql-sink] Startup completed
17 Dec 2015 13:35:37,993 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:184) - Starting Source http-source
17 Dec 2015 13:35:37,993 INFO [lifecycleSupervisor-1-4] (com.telefonica.iot.cygnus.interceptors.GroupingInterceptor.initialize:92) - Grouping rules read:
17 Dec 2015 13:35:37,994 ERROR [lifecycleSupervisor-1-4] (com.telefonica.iot.cygnus.interceptors.GroupingInterceptor.parseGroupingRules:165) - Error while parsing the Json-based grouping rules file. Details=null
17 Dec 2015 13:35:37,994 WARN [lifecycleSupervisor-1-4] (com.telefonica.iot.cygnus.interceptors.GroupingInterceptor.initialize:98) - Grouping rules syntax has errors
17 Dec 2015 13:35:37,994 INFO [lifecycleSupervisor-1-4] (org.mortbay.log.Slf4jLog.info:67) - jetty-6.1.26
17 Dec 2015 13:35:37,996 INFO [lifecycleSupervisor-1-4] (org.mortbay.log.Slf4jLog.info:67) - Started SocketConnector#0.0.0.0:5050
17 Dec 2015 13:35:37,996 INFO [lifecycleSupervisor-1-4] (org.apache.flume.instrumentation.MonitoredCounterGroup.start:94) - Component type: SOURCE, name: http-source started
Then I tried to subscribe the previously mentioned data to cygnus:
(curl localhost:1026/v1/subscribeContext -s -S --header 'Content-Type: application/json' \
--header 'Accept: application/json' -d #- | python -mjson.tool) <<EOF
{
"entities": [
{
"type": "Room",
"isPattern": "false",
"id": "Room1"
}
],
"attributes": [
"pressure"
"temperature"
],
"reference": "http://localhost:5050/notify",
"duration": "P1M",
"notifyConditions": [
{
"type": "ONCHANGE",
"condValues": [
"pressure",
"temperature"
]
}
],
"throttling": "PT1S"
}
EOF
Even after I updated the information on context Broker thinking it would trigger an event:
(curl localhost:1026/v1/updateContext -s -S --header 'Content-Type: application/json' \
--header 'Accept: application/json' -d #- | python -mjson.tool) <<EOF
{
"contextElements": [
{
"type": "Room",
"isPattern": "false",
"id": "Room1",
"attributes": [
{
"name": "temperature",
"type": "float",
"value": "333"
},
{
"name": "pressure",
"type": "integer",
"value": "555"
}
]
}
],
"updateAction": "APPEND"
}
EOF
But the cygnus log remainged exactly the same and its like nothing even got through to it. Which is odd considering my agent_1.conf:
# Copyright 2014 Telefónica Investigación y Desarrollo, S.A.U
#
# This file is part of fiware-cygnus (FI-WARE project).
#
# fiware-cygnus is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General
# Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any
# later version.
# fiware-cygnus is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied
# warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more
# details.
#
# You should have received a copy of the GNU Affero General Public License along with fiware-cygnus. If not, see
# http://www.gnu.org/licenses/.
#
# For those usages not covered by the GNU Affero General Public License please contact with iot_support at tid dot es
#=============================================
# To be put in APACHE_FLUME_HOME/conf/agent.conf
#
# General configuration template explaining how to setup a sink of each of the available types (HDFS, CKAN, MySQL).
#=============================================
# The next tree fields set the sources, sinks and channels used by Cygnus. You could use different names than the
# ones suggested below, but in that case make sure you keep coherence in properties names along the configuration file.
# Regarding sinks, you can use multiple types at the same time; the only requirement is to provide a channel for each
# one of them (this example shows how to configure 3 sink types at the same time). Even, you can define more than one
# sink of the same type and sharing the channel in order to improve the performance (this is like having
# multi-threading).
cygnusagent.sources = http-source
cygnusagent.sinks = mysql-sink
cygnusagent.channels = mysql-channel
#=============================================
# source configuration
# channel name where to write the notification events
cygnusagent.sources.http-source.channels = mysql-channel
# source class, must not be changed
cygnusagent.sources.http-source.type = org.apache.flume.source.http.HTTPSource
# listening port the Flume source will use for receiving incoming notifications
cygnusagent.sources.http-source.port = 5050
# Flume handler that will parse the notifications, must not be changed
cygnusagent.sources.http-source.handler = com.telefonica.iot.cygnus.handlers.OrionRestHandler
# URL target
cygnusagent.sources.http-source.handler.notification_target = /notify
# Default service (service semantic depends on the persistence sink)
cygnusagent.sources.http-source.handler.default_service = Trace_Data
# Default service path (service path semantic depends on the persistence sink)
cygnusagent.sources.http-source.handler.default_service_path = Sensor
# Number of channel re-injection retries before a Flume event is definitely discarded (-1 means infinite retries)
cygnusagent.sources.http-source.handler.events_ttl = 10
# Source interceptors, do not change
cygnusagent.sources.http-source.interceptors = ts gi
# TimestampInterceptor, do not change
cygnusagent.sources.http-source.interceptors.ts.type = timestamp
# GroupinInterceptor, do not change
cygnusagent.sources.http-source.interceptors.gi.type = com.telefonica.iot.cygnus.interceptors.GroupingInterceptor$Builder
# Grouping rules for the GroupingInterceptor, put the right absolute path to the file if necessary
# See the doc/design/interceptors document for more details
cygnusagent.sources.http-source.interceptors.gi.grouping_rules_conf_file = /usr/cygnus/conf/grouping_rules.conf
# ============================================
# OrionMySQLSink configuration
# channel name from where to read notification events
cygnusagent.sinks.mysql-sink.channel = mysql-channel
# sink class, must not be changed
cygnusagent.sinks.mysql-sink.type = com.telefonica.iot.cygnus.sinks.OrionMySQLSink
# true if the grouping feature is enabled for this sink, false otherwise
cygnusagent.sinks.mysql-sink.enable_grouping = false
# the FQDN/IP address where the MySQL server runs
cygnusagent.sinks.mysql-sink.mysql_host = 127.0.0.1
# the port where the MySQL server listes for incomming connections
cygnusagent.sinks.mysql-sink.mysql_port = 3306
# a valid user in the MySQL server
cygnusagent.sinks.mysql-sink.mysql_username = root
# password for the user above
cygnusagent.sinks.mysql-sink.mysql_password = klasika
# how the attributes are stored, either per row either per column (row, column)
cygnusagent.sinks.mysql-sink.attr_persistence = column
# select the table type from table-by-destination and table-by-service-path
cygnusagent.sinks.mysql-sink.table_type = table-by-destination
# number of notifications to be included within a processing batch
cygnusagent.sinks.mysql-sink.batch_size = 1
# timeout for batch accumulation
cygunsagent.sinks.mysql-sink.batch_timeout = 30
#=============================================
# mysql-channel configuration
# channel type (must not be changed)
cygnusagent.channels.mysql-channel.type = memory
# capacity of the channel
cygnusagent.channels.mysql-channel.capacity = 1000
# amount of bytes that can be sent per transaction
cygnusagent.channels.mysql-channel.transactionCapacity = 100
#============================================
It has 5050 and notify as the reference address. I double checked the cygnus_instance_1.conf as well and it is pointing at agent_1.conf
#####
#
# Configuration file for apache-flume
#
#####
# Copyright 2014 Telefonica Investigación y Desarrollo, S.A.U
#
# This file is part of fiware-cygnus (FI-WARE project).
#
# fiware-cygnus is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General
# Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any
# later version.
# fiware-cygnus is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied
# warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more
# details.
#
# You should have received a copy of the GNU Affero General Public License along with fiware-cygnus. If not, see
# http://www.gnu.org/licenses/.
#
# For those usages not covered by the GNU Affero General Public License please contact with iot_support at tid dot es
# Who to run cygnus as. Note that you may need to use root if you want
# to run cygnus in a privileged port (<1024)
CYGNUS_USER=cygnus
# Where is the config folder
CONFIG_FOLDER=/usr/cygnus/conf
# Which is the config file
CONFIG_FILE=/usr/cygnus/conf/agent_1.conf
# Name of the agent. The name of the agent is not trivial, since it is the base for the Flume parameters
# naming conventions, e.g. it appears in .sources.http-source.channels=...
AGENT_NAME=cygnusagent
# Name of the logfile located at /var/log/cygnus. It is important to put the extension '.log' in order to the log rotation works properly
LOGFILE_NAME=cygnus.log
# Administration port. Must be unique per instance
ADMIN_PORT=8081
# Polling interval (seconds) for the configuration reloading
POLLING_INTERVAL=30
This is the content of my config folder in /usr/cygnus/conf:
[root#centos conf]# ls
agent_1.conf cygnus_instance_1.conf flume-env.sh grouping_rules.conf krb5.conf krb5_login.conf log4j.properties.template
agent.conf.template cygnus_instance.conf.template flume-env.sh.template grouping_rules.conf.template krb5.conf.template log4j.properties README.md
I noticed that there is an exacted mirror of this in /etc/cygnus/conf but I didn't touch anything because the installation only intructs me to use the /usr/ folder.
Here is my Mysql create statement. In this table I am expecting to receive the context broker data but I get nothing of course since the log didnt register anything.
CREATE TABLE sensor_room1_room (
sensorID INT NOT NULL AUTO_INCREMENT,
recvTime mediumtext,
fiwareservicepath text,
entityId text,
entityType text,
pressure text,
pressure_md text,
temperature text,
temperature_md text,
PRIMARY KEY (sensorID));
Edit 1:
Here is the listener
[root#centos conf]# nc -l 5050
But when I tried subscribing or updating context, nothing was received on the listener side. I am not taking into account the client side of nc: nc 127.0.0.1 5050 because it successfully sends everything i type (even gibberish).
I also tried the test: /usr/cygnus/bin/cygnus-flume-ng agent --conf /usr/cygnus/conf/ -f /usr/cygnus/conf/agent_1.conf -n cygnusagent -Dflume.root.logger=DEBUG,console. I tried both 5050 and 8081 ports to subscribe to and then update context but nothing is read on the console.
Since I seriously have no idea why that subscription didn't work, but thanks to #fgalan I did manage to read the logs so I am posting the subscription that did trigger the event to cygnus:
(curl localhost:1026/v1/subscribeContext -s -S --header 'Content-Type: application/json' \
--header 'Accept: application/json' -d #- | python -mjson.tool) <<EOF
{
"entities": [
{
"type": "Room",
"isPattern": "false",
"id": "Room1"
}
],
"attributes": [
"temperature"
],
"reference": "http://localhost:5050/notify",
"duration": "P1M",
"notifyConditions": [
{
"type": "ONCHANGE",
"condValues": [
"pressure"
]
}
],
"throttling": "PT5S"
}
EOF
Thank you #fgalan one more time!
Related
I have installed using instructions at this link for the Install NGINX using NodePort option.
When I do ks logs -f ingress-nginx-controller-7f48b8-s7pg4 -n ingress-nginx I get :
W0304 09:33:40.568799 8 client_config.go:614] Neither --kubeconfig nor --master was
specified. Using the inClusterConfig. This might not work.
I0304 09:33:40.569097 8 main.go:241] "Creating API client" host="https://10.96.0.1:443"
I0304 09:33:40.584904 8 main.go:285] "Running in Kubernetes cluster" major="1" minor="23" git="v1.23.1+k0s" state="clean" commit="b230d3e4b9d6bf4b731d96116a6643786e16ac3f" platform="linux/amd64"
I0304 09:33:40.911443 8 main.go:105] "SSL fake certificate created" file="/etc/ingress-controller/ssl/default-fake-certificate.pem"
I0304 09:33:40.916404 8 main.go:115] "Enabling new Ingress features available since Kubernetes v1.18"
W0304 09:33:40.918137 8 main.go:127] No IngressClass resource with name nginx found. Only annotation will be used.
I0304 09:33:40.942282 8 ssl.go:532] "loading tls certificate" path="/usr/local/certificates/cert" key="/usr/local/certificates/key"
I0304 09:33:40.977766 8 nginx.go:254] "Starting NGINX Ingress controller"
I0304 09:33:41.007616 8 event.go:282] Event(v1.ObjectReference{Kind:"ConfigMap", Namespace:"ingress-nginx", Name:"ingress-nginx-controller", UID:"1a4482d2-86cb-44f3-8ebb-d6342561892f", APIVersion:"v1", ResourceVersion:"987560", FieldPath:""}): type: 'Normal' reason: 'CREATE' ConfigMap ingress-nginx/ingress-nginx-controller
E0304 09:33:42.087113 8 reflector.go:138] k8s.io/client-go#v0.20.2/tools/cache/reflector.go:167: Failed to watch *v1beta1.Ingress: failed to list *v1beta1.Ingress: the server could not find the requested resource
E0304 09:33:43.041954 8 reflector.go:138] k8s.io/client-go#v0.20.2/tools/cache/reflector.go:167: Failed to watch *v1beta1.Ingress: failed to list *v1beta1.Ingress: the server could not find the requested resource
E0304 09:33:44.724681 8 reflector.go:138] k8s.io/client-go#v0.20.2/tools/cache/reflector.go:167: Failed to watch *v1beta1.Ingress: failed to list *v1beta1.Ingress: the server could not find the requested resource
E0304 09:33:48.303789 8 reflector.go:138] k8s.io/client-go#v0.20.2/tools/cache/reflector.go:167: Failed to watch *v1beta1.Ingress: failed to list *v1beta1.Ingress: the server could not find the requested resource
E0304 09:33:59.113203 8 reflector.go:138] k8s.io/client-go#v0.20.2/tools/cache/reflector.go:167: Failed to watch *v1beta1.Ingress: failed to list *v1beta1.Ingress: the server could not find the requested resource
E0304 09:34:16.727052 8 reflector.go:138] k8s.io/client-go#v0.20.2/tools/cache/reflector.go:167: Failed to watch *v1beta1.Ingress: failed to list *v1beta1.Ingress: the server could not find the requested resource
I0304 09:34:39.216165 8 main.go:187] "Received SIGTERM, shutting down"
I0304 09:34:39.216773 8 nginx.go:372] "Shutting down controller queues"
E0304 09:34:39.217779 8 store.go:178] timed out waiting for caches to sync
I0304 09:34:39.217856 8 nginx.go:296] "Starting NGINX process"
I0304 09:34:39.218007 8 leaderelection.go:243] attempting to acquire leader lease ingress-nginx/ingress-controller-leader-nginx...
I0304 09:34:39.219741 8 queue.go:78] "queue has been shutdown, failed to enqueue" key="&ObjectMeta{Name:initial-sync,GenerateName:,Namespace:,SelfLink:,UID:,ResourceVersion:,Generation:0,CreationTimestamp:0001-01-01 00:00:00 +0000 UTC,DeletionTimestamp:<nil>,DeletionGracePeriodSeconds:nil,Labels:map[string]string{},Annotations:map[string]string{},OwnerReferences:[]OwnerReference{},Finalizers:[],ClusterName:,ManagedFields:[]ManagedFieldsEntry{},}"
I0304 09:34:39.219787 8 nginx.go:316] "Starting validation webhook" address=":8443" certPath="/usr/local/certificates/cert" keyPath="/usr/local/certificates/key"
I0304 09:34:39.242501 8 leaderelection.go:253] successfully acquired lease ingress-nginx/ingress-controller-leader-nginx
I0304 09:34:39.242807 8 queue.go:78] "queue has been shutdown, failed to enqueue" key="&ObjectMeta{Name:sync status,GenerateName:,Namespace:,SelfLink:,UID:,ResourceVersion:,Generation:0,CreationTimestamp:0001-01-01 00:00:00 +0000 UTC,DeletionTimestamp:<nil>,DeletionGracePeriodSeconds:nil,Labels:map[string]string{},Annotations:map[string]string{},OwnerReferences:[]OwnerReference{},Finalizers:[],ClusterName:,ManagedFields:[]ManagedFieldsEntry{},}"
I0304 09:34:39.242837 8 status.go:84] "New leader elected" identity="ingress-nginx-controller-7f48b8-s7pg4"
I0304 09:34:39.252025 8 status.go:204] "POD is not ready" pod="ingress-nginx/ingress-nginx-controller-7f48b8-s7pg4" node="fbcdcesdn02"
I0304 09:34:39.255282 8 status.go:132] "removing value from ingress status" address=[]
I0304 09:34:39.255328 8 nginx.go:380] "Stopping admission controller"
I0304 09:34:39.255379 8 nginx.go:388] "Stopping NGINX process"
E0304 09:34:39.255664 8 nginx.go:319] "Error listening for TLS connections" err="http: Server closed"
2022/03/04 09:34:39 [notice] 43#43: signal process started
I0304 09:34:40.263361 8 nginx.go:401] "NGINX process has stopped"
I0304 09:34:40.263396 8 main.go:195] "Handled quit, awaiting Pod deletion"
I0304 09:34:50.263585 8 main.go:198] "Exiting" code=0
When I do ks describe pod ingress-nginx-controller-7f48b8-s7pg4 -n ingress-nginx I get :
Name: ingress-nginx-controller-7f48b8-s7pg4
Namespace: ingress-nginx
Priority: 0
Node: fxxxxxxxx/10.XXX.XXX.XXX
Start Time: Fri, 04 Mar 2022 08:12:57 +0200
Labels: app.kubernetes.io/component=controller
app.kubernetes.io/instance=ingress-nginx
app.kubernetes.io/name=ingress-nginx
pod-template-hash=7f48b8
Annotations: kubernetes.io/psp: 00-k0s-privileged
Status: Running
IP: 10.244.0.119
IPs:
IP: 10.244.0.119
Controlled By: ReplicaSet/ingress-nginx-controller-7f48b8
Containers:
controller:
Container ID: containerd://638ff4d63b7ba566125bd6789d48db6e8149b06cbd9d887ecc57d08448ba1d7e
Image: k8s.gcr.io/ingress-nginx/controller:v0.48.1#sha256:e9fb216ace49dfa4a5983b183067e97496e7a8b307d2093f4278cd550c303899
Image ID: k8s.gcr.io/ingress-nginx/controller#sha256:e9fb216ace49dfa4a5983b183067e97496e7a8b307d2093f4278cd550c303899
Ports: 80/TCP, 443/TCP, 8443/TCP
Host Ports: 0/TCP, 0/TCP, 0/TCP
Args:
/nginx-ingress-controller
--election-id=ingress-controller-leader
--ingress-class=nginx
--configmap=$(POD_NAMESPACE)/ingress-nginx-controller
--validating-webhook=:8443
--validating-webhook-certificate=/usr/local/certificates/cert
--validating-webhook-key=/usr/local/certificates/key
State: Waiting
Reason: CrashLoopBackOff
Last State: Terminated
Reason: Completed
Exit Code: 0
Started: Fri, 04 Mar 2022 11:33:40 +0200
Finished: Fri, 04 Mar 2022 11:34:50 +0200
Ready: False
Restart Count: 61
Requests:
cpu: 100m
memory: 90Mi
Liveness: http-get http://:10254/healthz delay=10s timeout=1s period=10s #success=1 #failure=5
Readiness: http-get http://:10254/healthz delay=10s timeout=1s period=10s #success=1 #failure=3
Environment:
POD_NAME: ingress-nginx-controller-7f48b8-s7pg4 (v1:metadata.name)
POD_NAMESPACE: ingress-nginx (v1:metadata.namespace)
LD_PRELOAD: /usr/local/lib/libmimalloc.so
Mounts:
/usr/local/certificates/ from webhook-cert (ro)
/var/run/secrets/kubernetes.io/serviceaccount from kube-api-access-zvcnr (ro)
Conditions:
Type Status
Initialized True
Ready False
ContainersReady False
PodScheduled True
Volumes:
webhook-cert:
Type: Secret (a volume populated by a Secret)
SecretName: ingress-nginx-admission
Optional: false
kube-api-access-zvcnr:
Type: Projected (a volume that contains injected data from multiple sources)
TokenExpirationSeconds: 3607
ConfigMapName: kube-root-ca.crt
ConfigMapOptional: <nil>
DownwardAPI: true
QoS Class: Burstable
Node-Selectors: kubernetes.io/os=linux
Tolerations: node.kubernetes.io/not-ready:NoExecute op=Exists for 300s
node.kubernetes.io/unreachable:NoExecute op=Exists for 300s
Events:
Type Reason Age From Message
---- ------ ---- ---- -------
Warning Unhealthy 23m (x316 over 178m) kubelet Readiness probe failed: HTTP probe failed with statuscode: 500
Warning BackOff 8m52s (x555 over 174m) kubelet Back-off restarting failed container
Normal Pulled 3m54s (x51 over 178m) kubelet Container image "k8s.gcr.io/ingress-nginx/controller:v0.48.1#sha256:e9fb216ace49dfa4a5983b183067e97496e7a8b307d2093f4278cd550c303899" already present on machine
When I try to curl the health endpoints I get Connection refused :
The state of the pods shows that they are both not ready :
NAME READY STATUS RESTARTS AGE
ingress-nginx-admission-create-4hzzk 0/1 Completed 0 3h30m
ingress-nginx-controller-7f48b8-s7pg4 0/1 CrashLoopBackOff 63 (91s ago) 3h30m
I have tried to increase the values for initialDelaySeconds in /etc/nginx/nginx.conf but when I attempt to exec into the container (ks exec -it -n ingress-nginx ingress-nginx-controller-7f48b8-s7pg4 -- bash) I also get an error error: unable to upgrade connection: container not found ("controller")
I am not really sure where I should be looking in the overall setup.
I have installed using instructions at this link for the Install NGINX using NodePort option.
The problem is that you are using outdated k0s documentation:
https://docs.k0sproject.io/v1.22.2+k0s.1/examples/nginx-ingress/
You should use this link instead:
https://docs.k0sproject.io/main/examples/nginx-ingress/
You will install the controller-v1.0.0 version on your Kubernetes cluster by following the actual documentation link.
$ kubectl apply -f https://raw.githubusercontent.com/kubernetes/ingress-nginx/controller-v1.0.0/deploy/static/provider/baremetal/deploy.yaml
The result is:
$ sudo k0s kubectl get pods -n ingress-nginx
NAME READY STATUS RESTARTS AGE
ingress-nginx-admission-create-dw2f4 0/1 Completed 0 11m
ingress-nginx-admission-patch-4dmpd 0/1 Completed 0 11m
ingress-nginx-controller-75f58fbf6b-xrfxr 1/1 Running 0 11m
Our origin-node.service on the master node fails with:
root#master> systemctl start origin-node.service
Job for origin-node.service failed because the control process exited with error code. See "systemctl status origin-node.service" and "journalctl -xe" for details.
root#master> systemctl status origin-node.service -l
[...]
May 05 07:17:47 master origin-node[44066]: bootstrap.go:195] Part of the existing bootstrap client certificate is expired: 2020-02-20 13:14:27 +0000 UTC
May 05 07:17:47 master origin-node[44066]: bootstrap.go:56] Using bootstrap kubeconfig to generate TLS client cert, key and kubeconfig file
May 05 07:17:47 master origin-node[44066]: certificate_store.go:131] Loading cert/key pair from "/etc/origin/node/certificates/kubelet-client-current.pem".
May 05 07:17:47 master origin-node[44066]: server.go:262] failed to run Kubelet: cannot create certificate signing request: Post https://lb.openshift-cluster.mydomain.com:8443/apis/certificates.k8s.io/v1beta1/certificatesigningrequests: EOF
So it seems that kubelet-client-current.pem and/or kubelet-server-current.pem contains an expired certificate and the service tries to create a CSR using an endpoint which is probably not yet available (because the master is down). We tried redeploying the certificates according to the OpenShift documentation Redeploying Certificates, but this fails while detecting an expired certificate:
root#master> ansible-playbook -i /etc/ansible/hosts openshift-master/redeploy-openshift-ca.yml
[...]
TASK [openshift_certificate_expiry : Fail when certs are near or already expired] *******************************************************************************************************************************************
fatal: [master.openshift-cluster.mydomain.com]: FAILED! => {"changed": false, "msg": "Cluster certificates found to be expired or within 60 days of expiring. You may view the report at /root/cert-expiry-report.20200505T042754.html or /root/cert-expiry-report.20200505T042754.json.\n"}
[...]
root#master> cat /root/cert-expiry-report.20200505T042754.json
[...]
"kubeconfigs": [
{
"cert_cn": "O:system:cluster-admins, CN:system:admin",
"days_remaining": -75,
"expiry": "2020-02-20 13:14:27",
"health": "expired",
"issuer": "CN=openshift-signer#1519045219 ",
"path": "/etc/origin/node/node.kubeconfig",
"serial": 27,
"serial_hex": "0x1b"
},
{
"cert_cn": "O:system:cluster-admins, CN:system:admin",
"days_remaining": -75,
"expiry": "2020-02-20 13:14:27",
"health": "expired",
"issuer": "CN=openshift-signer#1519045219 ",
"path": "/etc/origin/node/node.kubeconfig",
"serial": 27,
"serial_hex": "0x1b"
},
[...]
"summary": {
"expired": 2,
"ok": 22,
"total": 24,
"warning": 0
}
}
There is a guide for OpenShift 4.4 for Recovering from expired control plane certificates, but that does not apply for 3.11 and we did not find such a guide for our version.
Is it possible to recreate the expired certificates without a running master node for 3.11? Thanks for any help.
OpenShift Ansible: https://github.com/openshift/openshift-ansible/releases/tag/openshift-ansible-3.11.153-2
Update 2020-05-06: I also executed redeploy-certificates.yml, but it fails at the same TASK:
root#master> ansible-playbook -i /etc/ansible/hosts playbooks/redeploy-certificates.yml
[...]
TASK [openshift_certificate_expiry : Fail when certs are near or already expired] ******************************************************************************
Wednesday 06 May 2020 04:07:06 -0400 (0:00:00.909) 0:01:07.582 *********
fatal: [master.openshift-cluster.mydomain.com]: FAILED! => {"changed": false, "msg": "Cluster certificates found to be expired or within 60 days of expiring. You may view the report at /root/cert-expiry-report.20200506T040603.html or /root/cert-expiry-report.20200506T040603.json.\n"}
Update 2020-05-11: Running with -e openshift_certificate_expiry_fail_on_warn=False results in:
root#master> ansible-playbook -i /etc/ansible/hosts -e openshift_certificate_expiry_fail_on_warn=False playbooks/redeploy-certificates.yml
[...]
TASK [Wait for master API to come back online] *****************************************************************************************************************
Monday 11 May 2020 03:48:56 -0400 (0:00:00.111) 0:02:25.186 ************
skipping: [master.openshift-cluster.mydomain.com]
TASK [openshift_control_plane : restart master] ****************************************************************************************************************
Monday 11 May 2020 03:48:56 -0400 (0:00:00.257) 0:02:25.444 ************
changed: [master.openshift-cluster.mydomain.com] => (item=api)
changed: [master.openshift-cluster.mydomain.com] => (item=controllers)
RUNNING HANDLER [openshift_control_plane : verify API server] **************************************************************************************************
Monday 11 May 2020 03:48:57 -0400 (0:00:00.945) 0:02:26.389 ************
FAILED - RETRYING: verify API server (120 retries left).
FAILED - RETRYING: verify API server (119 retries left).
[...]
FAILED - RETRYING: verify API server (1 retries left).
fatal: [master.openshift-cluster.mydomain.com]: FAILED! => {"attempts": 120, "changed": false, "cmd": ["curl", "--silent", "--tlsv1.2", "--max-time", "2", "--cacert", "/etc/origin/master/ca-bundle.crt", "https://lb.openshift-cluster.mydomain.com:8443/healthz/ready"], "delta": "0:00:00.182367", "end": "2020-05-11 03:51:52.245644", "msg": "non-zero return code", "rc": 35, "start": "2020-05-11 03:51:52.063277", "stderr": "", "stderr_lines": [], "stdout": "", "stdout_lines": []}
root#master> systemctl status origin-node.service -l
[...]
May 11 04:23:28 master.openshift-cluster.mydomain.com origin-node[109972]: E0511 04:23:28.077964 109972 bootstrap.go:195] Part of the existing bootstrap client certificate is expired: 2020-02-20 13:14:27 +0000 UTC
May 11 04:23:28 master.openshift-cluster.mydomain.com origin-node[109972]: I0511 04:23:28.078001 109972 bootstrap.go:56] Using bootstrap kubeconfig to generate TLS client cert, key and kubeconfig file
May 11 04:23:28 master.openshift-cluster.mydomain.com origin-node[109972]: I0511 04:23:28.080555 109972 certificate_store.go:131] Loading cert/key pair from "/etc/origin/node/certificates/kubelet-client-current.pem".
May 11 04:23:28 master.openshift-cluster.mydomain.com origin-node[109972]: F0511 04:23:28.130968 109972 server.go:262] failed to run Kubelet: cannot create certificate signing request: Post https://lb.openshift-cluster.mydomain.com:8443/apis/certificates.k8s.io/v1beta1/certificatesigningrequests: EOF
[...]
I have this same case in customer environment, this error is because the certified was expiry, i "cheated" changing da S.O date before the expiry date. And the origin-node service started in my masters:
systemctl status origin-node
● origin-node.service - OpenShift Node
Loaded: loaded (/etc/systemd/system/origin-node.service; enabled; vendor preset: disabled)
Active: active (running) since Sáb 2021-02-20 20:22:21 -02; 6min ago
Docs: https://github.com/openshift/origin
Main PID: 37230 (hyperkube)
Memory: 79.0M
CGroup: /system.slice/origin-node.service
└─37230 /usr/bin/hyperkube kubelet --v=2 --address=0.0.0.0 --allow-privileged=true --anonymous-auth=true --authentication-token-webhook=true --authentication-token-webhook-cache-ttl=5m --authorization-mode=Webhook --authorization-webhook-c...
Você tem mensagem de correio em /var/spool/mail/okd
The openshift_certificate_expiry role uses the openshift_certificate_expiry_fail_on_warn variable to determine if the playbook should fail when the days left are less than openshift_certificate_expiry_warning_days.
So try running the redeploy-certificates.yml with this additional variable set to "False":
ansible-playbook -i /etc/ansible/hosts -e openshift_certificate_expiry_fail_on_warn=False playbooks/redeploy-certificates.yml
Unable to initialize corosync running inside a docker container. The corosync-cfgtool -s command yields the following:
Could not initialize corosync configuration API error 12
The /etc/corosync/corosync.conf file has the following:
compatibility: whitetank
totem {
version: 2
secauth: off
threads: 0
interface {
ringnumber: 0
bindnetaddr: 127.0.0.1
mcastaddr: 239.255.1.1
mcastport: 5405
ttl: 1
}
}
logging {
fileline: off
to_stderr: no
to_logfile: yes
logfile: /var/log/corosync.log
to_syslog: yes
debug: off
timestamp: on
logger_subsys {
subsys: AMF
debug: off
}
}
The /var/log/corosync.log file shows the following:
May 02 20:13:22 corosync [MAIN ] Could not set SCHED_RR at priority 99: Operation not permitted (1)
May 02 20:13:22 corosync [MAIN ] Could not lock memory of service to avoid page faults: Cannot allocate memory (12)
May 02 20:13:22 corosync [MAIN ] Corosync Cluster Engine ('1.4.6'): started and ready to provide service.
May 02 20:13:22 corosync [MAIN ] Corosync built-in features: nss
May 02 20:13:22 corosync [MAIN ] Successfully read main configuration file '/etc/corosync/corosync.conf'.
May 02 20:13:22 corosync [TOTEM ] Initializing transport (UDP/IP Multicast).
May 02 20:13:22 corosync [TOTEM ] Initializing transmit/receive security: libtomcrypt SOBER128/SHA1HMAC (mode 0).
I was running the following in a bash script:
service corosync start
service corosync status
corosync-cfgtool -s
Apparently it was running too quickly and not giving corosync enough time to initialize. Changing the script to the following seems to have worked:
service corosync start
service corosync status
sleep 5
corosync-cfgtool -s
I now see the following output from corosync-cfgtool -s:
Printing ring status.
Local node ID 16777343
RING ID 0
id = 127.0.0.1
status = ring 0 active with no faults
EDITED:
I've an OpenShift cluster with one master and two nodes. I've installed NFS on the master and NFS client on the nodes.
I've followed the wordpress example with NFS: https://github.com/openshift/origin/tree/master/examples/wordpress
I did the following on my master as: oc login -u system:admin:
mkdir /home/data/pv0001
mkdir /home/data/pv0002
chown -R nfsnobody:nfsnobody /home/data
chmod -R 777 /home/data/
# Add to /etc/exports
/home/data/pv0001 *(rw,sync,no_root_squash)
/home/data/pv0002 *(rw,sync,no_root_squash)
# Enable the new exports without bouncing the NFS service
exportfs -a
So exportfs shows:
/home/data/pv0001
<world>
/home/data/pv0002
<world>
$ setsebool -P virt_use_nfs 1
# Create the persistent volumes for NFS.
# I did not change anything in the yaml-files
$ oc create -f examples/wordpress/nfs/pv-1.yaml
$ oc create -f examples/wordpress/nfs/pv-2.yaml
$ oc get pv
NAME LABELS CAPACITY ACCESSMODES STATUS CLAIM REASON
pv0001 <none> 1073741824 RWO,RWX Available
pv0002 <none> 5368709120 RWO Available
This is also what I get.
Than I'm going to my node:
oc login
test-admin
And I create a wordpress project:
oc new-project wordpress
# Create claims for storage in my project (same namespace).
# The claims in this example carefully match the volumes created above.
$ oc create -f examples/wordpress/pvc-wp.yaml
$ oc create -f examples/wordpress/pvc-mysql.yaml
$ oc get pvc
NAME LABELS STATUS VOLUME
claim-mysql map[] Bound pv0002
claim-wp map[] Bound pv0001
This looks exactly the same for me.
Launch the MySQL pod.
oc create -f examples/wordpress/pod-mysql.yaml
oc create -f examples/wordpress/service-mysql.yaml
oc create -f examples/wordpress/pod-wordpress.yaml
oc create -f examples/wordpress/service-wp.yaml
oc get svc
NAME LABELS SELECTOR IP(S) PORT(S)
mysql name=mysql name=mysql 172.30.115.137 3306/TCP
wpfrontend name=wpfrontend name=wordpress 172.30.170.55 5055/TCP
So actually everyting seemed to work! But when I'm asking for my pod status I get the following:
[root#ip-10-0-0-104 pv0002]# oc get pod
NAME READY STATUS RESTARTS AGE
mysql 0/1 Image: openshift/mysql-55-centos7 is ready, container is creating 0 6h
wordpress 0/1 Image: wordpress is not ready on the node 0 6h
The pods are in pending state and in the webconsole they're giving the following error:
12:12:51 PM mysql Pod failedMount Unable to mount volumes for pod "mysql_wordpress": exit status 32 (607 times in the last hour, 41 minutes)
12:12:51 PM mysql Pod failedSync Error syncing pod, skipping: exit status 32 (607 times in the last hour, 41 minutes)
12:12:48 PM wordpress Pod failedMount Unable to mount volumes for pod "wordpress_wordpress": exit status 32 (604 times in the last hour, 40 minutes)
12:12:48 PM wordpress Pod failedSync Error syncing pod, skipping: exit status 32 (604 times in the last hour, 40 minutes)
Unable to mount +timeout. But when I'm going to my node and I'm doing the following (test is a created directory on my node):
mount -t nfs -v masterhostname:/home/data/pv0002 /test
And I place some file in my /test on my node than it appears in my /home/data/pv0002 on my master so that seems to work.
What's the reason that it's unable to mount in OpenShift?
I've been stuck on this for a while.
LOGS:
Oct 21 10:44:52 ip-10-0-0-129 docker: time="2015-10-21T10:44:52.795267904Z" level=info msg="GET /containers/json"
Oct 21 10:44:52 ip-10-0-0-129 origin-node: E1021 10:44:52.832179 1148 mount_linux.go:103] Mount failed: exit status 32
Oct 21 10:44:52 ip-10-0-0-129 origin-node: Mounting arguments: localhost:/home/data/pv0002 /var/lib/origin/openshift.local.volumes/pods/2bf19fe9-77ce-11e5-9122-02463424c049/volumes/kubernetes.io~nfs/pv0002 nfs []
Oct 21 10:44:52 ip-10-0-0-129 origin-node: Output: mount.nfs: access denied by server while mounting localhost:/home/data/pv0002
Oct 21 10:44:52 ip-10-0-0-129 origin-node: E1021 10:44:52.832279 1148 kubelet.go:1206] Unable to mount volumes for pod "mysql_wordpress": exit status 32; skipping pod
Oct 21 10:44:52 ip-10-0-0-129 docker: time="2015-10-21T10:44:52.832794476Z" level=info msg="GET /containers/json?all=1"
Oct 21 10:44:52 ip-10-0-0-129 docker: time="2015-10-21T10:44:52.835916304Z" level=info msg="GET /images/openshift/mysql-55-centos7/json"
Oct 21 10:44:52 ip-10-0-0-129 origin-node: E1021 10:44:52.837085 1148 pod_workers.go:111] Error syncing pod 2bf19fe9-77ce-11e5-9122-02463424c049, skipping: exit status 32
Logs showed Oct 21 10:44:52 ip-10-0-0-129 origin-node: Output: mount.nfs: access denied by server while mounting localhost:/home/data/pv0002
So it failed mounting on localhost.
to create my persistent volume I've executed this yaml:
{
"apiVersion": "v1",
"kind": "PersistentVolume",
"metadata": {
"name": "registry-volume"
},
"spec": {
"capacity": {
"storage": "20Gi"
},
"accessModes": [ "ReadWriteMany" ],
"nfs": {
"path": "/home/data/pv0002",
"server": "localhost"
}
}
}
So I was mounting to /home/data/pv0002 but this path was not on the localhost but on my master server (which is ose3-master.example.com. So I created my PV in a wrong way.
{
"apiVersion": "v1",
"kind": "PersistentVolume",
"metadata": {
"name": "registry-volume"
},
"spec": {
"capacity": {
"storage": "20Gi"
},
"accessModes": [ "ReadWriteMany" ],
"nfs": {
"path": "/home/data/pv0002",
"server": "ose3-master.example.com"
}
}
}
This was also in a training environment. It's recommended to have a NFS server outside of your cluster to mount to.
So i have read all the documentation and followed the tutorial on MySQL persistence but i can't still presist any kind of data on MySQL database.
Even though i'm puting the presistence mode = row it doesn't create any database nor table.
What am i doing wrong?
My Subscription:
python2.7 SetSubscription.py bustest4 http://localhost:5050/notify
Output:
* Asking to http://localhost:1026/v1/subscribeContext
* Headers: {'Fiware-Service': 'fiwaretestapi', 'content-type': 'application/json ', 'accept': 'application/json', 'X-Auth-Token': 'NULL'}
* Sending PAYLOAD:
{
"reference": "http://localhost:5050/notify",
"throttling": "PT5S",
"entities": [
{
"type": "",
"id": "bustest4",
"isPattern": "false"
}
],
"attributes": [
"temperature"
],
"duration": "P1M",
"notifyConditions": [
{
"condValues": [
"temperature"
],
"type": "ONCHANGE"
}
]
}
...
* Status Code: 200
{
"subscribeResponse" : {
"subscriptionId" : "5567332298add18cc3e183ac",
"duration" : "P1M",
"throttling" : "PT5S"
}
}
My agent_a1.conf:
#=============================================
# source configuration
# channel name where to write the notification events
cygnusagent.sources.http-source.channels = hdfs-channel mysql-channel ckan-channel
# source class, must not be changed
cygnusagent.sources.http-source.type = org.apache.flume.source.http.HTTPSource
# listening port the Flume source will use for receiving incoming notifications
cygnusagent.sources.http-source.port = 5050
# Flume handler that will parse the notifications, must not be changed
cygnusagent.sources.http-source.handler = es.tid.fiware.fiwareconnectors.cygnus.handlers.OrionRestHandler
# URL target
cygnusagent.sources.http-source.handler.notification_target = /notify
# Default service (service semantic depends on the persistence sink)
cygnusagent.sources.http-source.handler.default_service = fiwaretestapi
# Default service path (service path semantic depends on the persistence sink)
cygnusagent.sources.http-source.handler.default_service_path = /
# Number of channel re-injection retries before a Flume event is definitely discarded (-1 means infinite retries)
cygnusagent.sources.http-source.handler.events_ttl = 10
# Source interceptors, do not change
cygnusagent.sources.http-source.interceptors = ts de
# Timestamp interceptor, do not change
cygnusagent.sources.http-source.interceptors.ts.type = timestamp
# Destination extractor interceptor, do not change
cygnusagent.sources.http-source.interceptors.de.type = es.tid.fiware.fiwareconnectors.cygnus.interceptors.DestinationExtractor$Builder
# Matching table for the destination extractor interceptor, put the right absolute path to the file if necessary
# See the doc/design/interceptors document for more details
cygnusagent.sources.http-source.interceptors.de.matching_table = /usr/cygnus/conf/matching_table.conf
# ============================================
# OrionMySQLSink configuration
# channel name from where to read notification events
cygnusagent.sinks.mysql-sink.channel = mysql-channel
# sink class, must not be changed
cygnusagent.sinks.mysql-sink.type = es.tid.fiware.fiwareconnectors.cygnus.sinks.OrionMySQLSink
# the FQDN/IP address where the MySQL server runs
cygnusagent.sinks.mysql-sink.mysql_host = localhost
# the port where the MySQL server listes for incomming connections
cygnusagent.sinks.mysql-sink.mysql_port = 3306
# a valid user in the MySQL server
cygnusagent.sinks.mysql-sink.mysql_username = root
# password for the user above
cygnusagent.sinks.mysql-sink.mysql_password = ***********
# how the attributes are stored, either per row either per column (row, column)
cygnusagent.sinks.mysql-sink.attr_persistence = row
#=============================================
# mysql-channel configuration
# channel type (must not be changed)
cygnusagent.channels.mysql-channel.type = memory
# capacity of the channel
cygnusagent.channels.mysql-channel.capacity = 1000
# amount of bytes that can be sent per transaction
cygnusagent.channels.mysql-channel.transactionCapacity = 100
My cygnus_instance_c1.conf:
# Who to run cygnus as. Note that you may need to use root if you want
# to run cygnus in a privileged port (<1024)
CYGNUS_USER=root
# Where is the config folder
CONFIG_FOLDER=/usr/cygnus/conf
# Which is the config file
CONFIG_FILE=/usr/cygnus/conf/agent_a1.conf
# Name of the agent. The name of the agent is not trivial, since it is the base for the Flume parameters
# naming conventions, e.g. it appears in .sources.http-source.channels=...
AGENT_NAME=cygnususer
# Name of the logfile located at /var/log/cygnus. It is important to put the extension '.log' in order to the log rotation works properly
LOGFILE_NAME=cygnus.log
# Administration port. Must be unique per instance
ADMIN_PORT=8081
My cygnus.log:
Info: Sourcing environment configuration script /usr/cygnus/conf/flume-env.sh
Warning: JAVA_HOME is not set!
+ exec /usr/bin/java -Xmx20m -Dflume.log.file=cygnus.log -cp '/usr/cygnus/conf:/usr/cygnus/lib/*:/usr/cygnus/plugins.d/cygnus/lib/*:/usr/cygnus/plugins.d/cygnus/libext/*' -Djava.library.path= es.tid.fiware.fiwareconnectors.cygnus.nodes.CygnusApplication -p 8081 -f /usr/cygnus/conf/agent_a1.conf -n root
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/usr/cygnus/lib/slf4j-log4j12-1.6.1.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/usr/cygnus/plugins.d/cygnus/lib/cygnus-0.7.1-jar-with-dependencies.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
EDIT:
So after some changes i got the log file to work and i found out that the 8081 port was already in use. Can you explain me what the ADMIN_PORT is used for, what port is it recommended to be?
LOG FILE:
02 Jun 2015 05:16:40,680 INFO [conf-file-poller-0] (org.apache.flume.node.PollingPropertiesFileConfigurationProvider$FileWatcherRunnable.run:133) - Reloading configuration file:/usr/cygnus/conf/agent_a1.conf
02 Jun 2015 05:16:40,685 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,686 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,686 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:930) - Added sinks: mysql-sink Agent: cygnusagent
02 Jun 2015 05:16:40,686 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,687 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,687 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,687 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,687 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration$AgentConfiguration.addProperty:1016) - Processing:mysql-sink
02 Jun 2015 05:16:40,692 INFO [conf-file-poller-0] (org.apache.flume.conf.FlumeConfiguration.validateConfiguration:140) - Post-validation flume configuration contains configuration for agents: [cygnusagent]
02 Jun 2015 05:16:40,692 WARN [conf-file-poller-0] (org.apache.flume.node.AbstractConfigurationProvider.getConfiguration:138) - No configuration found for this host:root
02 Jun 2015 05:16:40,693 INFO [conf-file-poller-0] (org.apache.flume.node.Application.stopAllComponents:101) - Shutting down configuration: { sourceRunners:{} sinkRunners:{} channels:{} }
02 Jun 2015 05:16:40,693 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:138) - Starting new configuration:{ sourceRunners:{} sinkRunners:{} channels:{} }
02 Jun 2015 05:16:40,694 INFO [conf-file-poller-0] (es.tid.fiware.fiwareconnectors.cygnus.nodes.CygnusApplication.startManagementInterface:85) - Starting a Jetty server listening on port 8081 (Management Interface)
02 Jun 2015 05:16:40,695 INFO [conf-file-poller-0] (org.apache.flume.node.Application.stopAllComponents:101) - Shutting down configuration: { sourceRunners:{} sinkRunners:{} channels:{} }
02 Jun 2015 05:16:40,695 INFO [conf-file-poller-0] (org.apache.flume.node.Application.startAllComponents:138) - Starting new configuration:{ sourceRunners:{} sinkRunners:{} channels:{} }
02 Jun 2015 05:16:40,695 INFO [conf-file-poller-0] (es.tid.fiware.fiwareconnectors.cygnus.nodes.CygnusApplication.startManagementInterface:85) - Starting a Jetty server listening on port 8081 (Management Interface)
02 Jun 2015 05:16:40,696 INFO [Thread-26] (org.mortbay.log.Slf4jLog.info:67) - jetty-6.1.26
02 Jun 2015 05:16:40,704 WARN [Thread-26] (org.mortbay.log.Slf4jLog.warn:76) - failed SocketConnector#0.0.0.0:8081: java.net.BindException: Address already in use
02 Jun 2015 05:16:40,704 WARN [Thread-26] (org.mortbay.log.Slf4jLog.warn:76) - failed Server#4f1b95f: java.net.BindException: Address already in use
02 Jun 2015 05:16:40,704 FATAL [Thread-26] (es.tid.fiware.fiwareconnectors.cygnus.http.JettyServer.run:63) - Fatal error running the Management Interface. Details=Address already in use
02 Jun 2015 05:16:40,705 INFO [Thread-27] (org.mortbay.log.Slf4jLog.info:67) - jetty-6.1.26
02 Jun 2015 05:16:40,709 WARN [Thread-27] (org.mortbay.log.Slf4jLog.warn:76) - failed SocketConnector#0.0.0.0:8081: java.net.BindException: Address already in use
02 Jun 2015 05:16:40,709 WARN [Thread-27] (org.mortbay.log.Slf4jLog.warn:76) - failed Server#ed4c222: java.net.BindException: Address already in use
02 Jun 2015 05:16:40,709 FATAL [Thread-27] (es.tid.fiware.fiwareconnectors.cygnus.http.JettyServer.run:63) - Fatal error running the Management Interface. Details=Address already in use
EDIT 2:
My script that updates entity on Context Broker:
BASE_URL = 'http://localhost:1026'
UPDATE_URL = BASE_URL+'/ngsi10/updateContext'
HEADERS = {
'Content-Type': 'application/json',
'Accept': 'application/json',
'Fiware-Service' : 'fiwaretestapi',
'Fiware-ServicePath': '/'
}
UPDATE_EXAMPLE = {
"contextElements": [
{
"type": "",
"isPattern": "false",
"id": "bustest4",
"attributes": [
{
"name": "temperature",
"type": "int",
"value": "99"
}
]
}
],
"updateAction": "APPEND"
}
def post(url, data):
""""""
req = urllib2.Request(url, data, HEADERS)
f = urllib2.urlopen(req)
result = json.loads(f.read())
f.close()
return result
if __name__ == "__main__":
print post(UPDATE_URL, json.dumps(UPDATE_EXAMPLE))
EDIT3:
Even though i set the admin port to be 8085 on the cygnus agent configuration it tries to bind to the 8081, is that normal?
Here are the logs from the cygnus:
time=2015-06-12T05:56:39.820EDT | lvl=INFO | trans= | function=start | comp=Cygnu s | msg=org.apache.flume.instrumentation.MonitoredCounterGroup[94] : Component ty pe: CHANNEL, name: mysql-channel started
time=2015-06-12T05:56:39.821EDT | lvl=INFO | trans= | function=startAllComponents | comp=Cygnus | msg=org.apache.flume.node.Application[173] : Starting Sink mysql -sink
time=2015-06-12T05:56:39.821EDT | lvl=INFO | trans= | function=startAllComponents | comp=Cygnus | msg=org.apache.flume.node.Application[184] : Starting Source htt p-source
time=2015-06-12T05:56:39.821EDT | lvl=INFO | trans= | function=startManagementInt erface | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.nodes.CygnusAppl ication[85] : Starting a Jetty server listening on port 8081 (Management Interfac e)
time=2015-06-12T05:56:39.822EDT | lvl=INFO | trans= | function=start | comp=Cygnu s | msg=es.tid.fiware.fiwareconnectors.cygnus.sinks.OrionMySQLSink[151] : [mysql- sink] Startup completed
time=2015-06-12T05:56:39.823EDT | lvl=INFO | trans= | function=info | comp=Cygnus | msg=org.mortbay.log.Slf4jLog[67] : jetty-6.1.26
time=2015-06-12T05:56:39.824EDT | lvl=INFO | trans= | function=info | comp=Cygnus | msg=org.mortbay.log.Slf4jLog[67] : jetty-6.1.26
time=2015-06-12T05:56:39.825EDT | lvl=INFO | trans= | function=info | comp=Cygnus | msg=org.mortbay.log.Slf4jLog[67] : Started SocketConnector#0.0.0.0:5050
time=2015-06-12T05:56:39.825EDT | lvl=INFO | trans= | function=start | comp=Cygnu s | msg=org.apache.flume.instrumentation.MonitoredCounterGroup[94] : Component ty pe: SOURCE, name: http-source started
time=2015-06-12T05:56:39.827EDT | lvl=WARN | trans= | function=warn | comp=Cygnus | msg=org.mortbay.log.Slf4jLog[76] : failed SocketConnector#0.0.0.0:8081: java.n et.BindException: Address already in use
time=2015-06-12T05:56:39.827EDT | lvl=WARN | trans= | function=warn | comp=Cygnus | msg=org.mortbay.log.Slf4jLog[76] : failed Server#1c9c5521: java.net.BindExcept ion: Address already in use
time=2015-06-12T05:56:39.827EDT | lvl=FATAL | trans= | function=run | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.http.JettyServer[63] : Fatal error r unning the Management Interface. Details=Address already in use
Log when i make a subscription:
time=2015-06-12T06:03:56.529EDT | lvl=INFO | trans=1434103313-190-0000000000 | fu nction=getEvents | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.handle rs.OrionRestHandler[153] : Starting transaction (1434103313-190-0000000000)
time=2015-06-12T06:03:56.535EDT | lvl=INFO | trans=1434103313-190-0000000000 | fu nction=getEvents | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.handle rs.OrionRestHandler[239] : Received data ({ "subscriptionId" : "557aae8c98add18c c3e183b6", "originator" : "localhost", "contextResponses" : [ { "contex tElement" : { "type" : "thing", "isPattern" : "false", "id" : "autocarro1", "attributes" : [ { "name" : "temperatu re", "type" : "int", "value" : "95", "metadatas" : [ { "name" : "TimeInstant", "type" : "ISO8601", "value" : "2015-06-03T09:17:44.046583Z" } ] } ] }, "statusCode" : { "code" : "200", "reasonPhrase" : "OK" } } ]})
time=2015-06-12T06:03:56.540EDT | lvl=INFO | trans=1434103313-190-0000000000 | fu nction=getEvents | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.handle rs.OrionRestHandler[261] : Event put in the channel (id=1983722072, ttl=10)
time=2015-06-12T06:03:56.724EDT | lvl=INFO | trans=1434103313-190-0000000000 | fu nction=process | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.sinks.Or ionSink[126] : Event got from the channel (id=1983722072, headers={timestamp=1434 103436542, content-type=application/json, transactionId=1434103313-190-0000000000 , fiware-service=fiwaretestapi, fiware-servicepath=, ttl=10, destination=autocarr o1_thing}, bodyLength=657)
time=2015-06-12T06:03:57.260EDT | lvl=INFO | trans=1434103313-190-0000000000 | fu nction=persist | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.sinks.Or ionMySQLSink[227] : [mysql-sink] Persisting data at OrionMySQLSink. Database: fiw aretestapi, Table: autocarro1_thing, Data: 1434103436,2015-06-12T06:03:56.542,aut ocarro1,thing,temperature,thing,95,[{"name":"TimeInstant","type":"ISO8601","value ":"2015-06-03T09:17:44.046583Z"}]
time=2015-06-12T06:03:57.270EDT | lvl=INFO | trans=1434103313-190-0000000000 | fu nction=process | comp=Cygnus | msg=es.tid.fiware.fiwareconnectors.cygnus.sinks.Or ionSink[187] : Finishing transaction (1434103313-190-0000000000)
As I can see in the log, most probably Cygnus is running but not starting any Flume component (any source, channel or sink). This is due to some configuration errors.
Regarding agent_a1.conf file:
It is missing the list of sources, channels and sinks:
cygnusagent.sources = http-source
cygnusagent.sinks = mysql-sink
cygnusagent.channels = mysql-channel
cygnusagent.sources.http-source.channels value should be mysql-channel
Regarding cygnus_instance_c1.conf:
AGENT_NAME value must be cygnusagent
Which version have you installed? Are you reunning Cygnus as a service or as an standalone process?
In adition, you could try to start Cygnus in DEBUG mode? Simply edit the /usr/cygnus/conf/log4j.properties file.
Do the proposed changes and see how the log evolves! :)
EDIT 1
Such a "fatal error" is not so fatal. It was a bug appearing in Cygnus 0.7.1, currently fixed. Anyway, even in 0.7.1 it did not affect the normal behaviour of Cygnus since the management port is only used for retrieving the version, nothing important.
Did you try to send some update context to Orion in order a notification is received by Cygnus? Even by simulating the notification? Please, see the Cygnus Quick Start Guide for an example about how to make such a simulation.
EDIT 2
Cygnus packages names es.tid.fiware.fiwareconnectors.cygnus... were replaced by com.telefonica.iot.cygnus... from release 0.8.0 (or maybe 0.9.0).