I am getting the error while running make-and-install.sh caffe . I have linked the /usr/local/cuda/libcudart.so to /usr/lib/libcudart.so and other files also
g++ .build_release/tools/caffe.o .build_release/lib/libcaffe.a -o .build_release/tools/caffe.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
g++ .build_release/tools/dump_network.o .build_release/lib/libcaffe.a -o .build_release/tools/dump_network.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
g++ .build_release/tools/extract_features.o .build_release/lib/libcaffe.a -o .build_release/tools/extract_features.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
make: *** [.build_release/tools/extract_features.bin] Error 1
make: *** Waiting for unfinished jobs....
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
make: *** [.build_release/tools/dump_network.bin] Error 1
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
make: *** [.build_release/tools/caffe.bin] Error 1
g++ .build_release/tools/caffe.o .build_release/lib/libcaffe.a -o .build_release/tools/caffe.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
make: *** [.build_release/tools/caffe.bin] Error 1
tarun#tarun-Inspiron-3542:~/Desktop/SA_project/sirius-caffe$ ln -s /usr/local/cuda/lib/libcuda.so.7.5 /usr/lib/libcuda.so.7.5
ln: failed to create symbolic link ‘/usr/lib/libcuda.so.7.5’: File exists
tarun#tarun-Inspiron-3542:~/Desktop/SA_project/sirius-caffe$ sudo ./make-and-install.s
sudo: ./make-and-install.s: command not found
tarun#tarun-Inspiron-3542:~/Desktop/SA_project/sirius-caffe$ sudo ./make-and-install.sh
g++ .build_release/tools/caffe.o .build_release/lib/libcaffe.a -o .build_release/tools/caffe.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
g++ .build_release/tools/dump_network.o .build_release/lib/libcaffe.a -o .build_release/tools/dump_network.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
g++ .build_release/tools/extract_features.o .build_release/lib/libcaffe.a -o .build_release/tools/extract_features.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
make: *** [.build_release/tools/extract_features.bin] Error 1
make: *** Waiting for unfinished jobs....
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
collect2: ld returned 1 exit status
make: *** [.build_release/tools/dump_network.bin] Error 1
make: *** [.build_release/tools/caffe.bin] Error 1
g++ .build_release/tools/caffe.o .build_release/lib/libcaffe.a -o .build_release/tools/caffe.bin -fPIC -DNDEBUG -O2 -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/local/include -I.build_release/src -I./src -I./include -I/usr/local/include/opencv2/core/include -Wall -Wno-sign-compare -L/usr/lib -L/usr/local/lib -L/usr/lib -L/usr/local/include/opencv2/core/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lopencv_core -lopencv_imgproc -lpthread -lboost_thread -lopenblas
/usr/bin/ld: cannot find -lcudart
/usr/bin/ld: cannot find -lcublas
/usr/bin/ld: cannot find -lcurand
collect2: ld returned 1 exit status
make: *** [.build_release/tools/caffe.bin] Error 1
any kind of help will be appreciated.
Is there some problem with the libraries or the path .
Edit to add
ls -l /usr/lib/cu*
total 32
drwxr-xr-x 2 root root 4096 Aug 29 22:11 backend
drwxr-xr-x 2 root root 4096 Aug 11 11:07 backend-available
drwxr-xr-x 2 root root 4096 Aug 11 11:07 cgi-bin
drwxr-xr-x 2 root root 4096 Aug 11 11:07 daemon
drwxr-xr-x 2 root root 4096 Aug 11 11:07 driver
drwxr-xr-x 2 root root 4096 Aug 11 11:07 filter
drwxr-xr-x 2 root root 4096 Aug 11 11:07 monitor
drwxr-xr-x 2 root root 4096 Aug 11 11:07 notifier
edit your post with the output of ls -l /usr/lib/cu*. Additionally, do file /usr/lib/libcudart.so (I'm guessing that your link (ln) is invalid.
^^^^^ Already done ^^^^^
As the broken link is confirmed, go to the /usr/lib/ directory and link (ln) again.
ln -s /usr/local/cuda/libcudart.so /usr/lib/libcudart.so
do this step for all desired libraries.
As mentioned by #RobertCrovella, it appears there is some library knowledge required too, so add -L/usr/local/cuda/lib64.
Now, after typing all of that out, I would recommend not moving/linking any files, just add -L /usr/local/cuda -L/usr/local/cuda/lib64 which will find all of your cuda libraries.
Related
I am getting the following exception while building the ROM for a lineageos project and need some help diagnosing and resolving the issue:
FAILED: /home/lineageos/out/target/product/tb8504f/obj_arm/SHARED_LIBRARIES/audio.primary.msm8937_intermediates/audio_extn/utils.o
/bin/bash -c "PWD=/proc/self/cwd prebuilts/misc/linux-x86/ccache/ccache prebuilts/clang/host/linux-x86/clang-4053586/bin/clang -I device/lenovo/tb8504f/include -I /home/lineageos/out/target/product/tb8504f/obj/KERNEL_OBJ/usr/include -I /home/lineageos/out/target/product/tb8504f/obj/KERNEL_OBJ/usr/techpack/audio/include -I /home/lineageos/out/target/product/tb8504f/obj/vendor/qcom/opensource/audio-kernel/include -I external/tinyalsa/include -I external/tinycompress/include -I system/media/audio_utils/include -I external/expat/lib -I hardware/libhardware/include -I system/media/audio_route/include -I system/media/audio_effects/include -I hardware/qcom/audio-caf/msm8996/hal/msm8916 -I hardware/qcom/audio-caf/msm8996/hal/audio_extn -I hardware/qcom/audio-caf/msm8996/hal/voice_extn -I /home/lineageos/out/target/product/tb8504f/obj/include/mm-audio/sound_trigger -I hardware/qcom/audio-caf/msm8996/hal -I /home/lineageos/out/target/product/tb8504f/obj_arm/SHARED_LIBRARIES/audio.primary.msm8937_intermediates -I /home/lineageos/out/target/product/tb8504f/gen/SHARED_LIBRARIES/audio.primary.msm8937_intermediates -I libnativehelper/include_deprecated \$(cat /home/lineageos/out/target/product/tb8504f/obj_arm/SHARED_LIBRARIES/audio.primary.msm8937_intermediates/import_includes) -I system/core/include -I system/media/audio/include -I hardware/libhardware_legacy/include -I hardware/ril/include -I libnativehelper/include -I frameworks/native/include -I frameworks/native/opengl/include -I frameworks/av/include -isystem /home/lineageos/out/target/product/tb8504f/obj/include -isystem bionic/libc/arch-arm/include -isystem bionic/libc/include -isystem bionic/libc/kernel/uapi -isystem bionic/libc/kernel/uapi/asm-arm -isystem bionic/libc/kernel/android/scsi -isystem bionic/libc/kernel/android/uapi -c -fno-exceptions -Wno-multichar -ffunction-sections -fdata-sections -funwind-tables -fstack-protector-strong -Wa,--noexecstack -Werror=format-security -D_FORTIFY_SOURCE=2 -fno-short-enums -no-canonical-prefixes -DNDEBUG -g -Wstrict-aliasing=2 -DANDROID -fmessage-length=0 -W -Wall -Wno-unused -Winit-self -Wpointer-arith -DNDEBUG -UDEBUG -fdebug-prefix-map=/proc/self/cwd= -D__compiler_offsetof=__builtin_offsetof -Werror=int-conversion -Wno-reserved-id-macro -Wno-format-pedantic -Wno-unused-command-line-argument -fcolor-diagnostics -Wno-expansion-to-defined -fdebug-prefix-map=\$PWD/= -Werror=return-type -Werror=non-virtual-dtor -Werror=address -Werror=sequence-point -Werror=date-time -nostdlibinc -msoft-float -mfloat-abi=softfp -mfpu=neon -mcpu=cortex-a53 -mfpu=neon-fp-armv8 -D__ARM_FEATURE_LPAE=1 -target arm-linux-androideabi -Bprebuilts/gcc/linux-x86/arm/arm-linux-androideabi-4.9/arm-linux-androideabi/bin -std=gnu99 -O2 -fomit-frame-pointer -fstrict-aliasing -DPLATFORM_MSM8916 -DUSE_VENDOR_EXTN -DHDMI_EDID -DUSE_LL_AS_PRIMARY_OUTPUT -DPCM_OFFLOAD_ENABLED -DANC_HEADSET_ENABLED -DHIFI_AUDIO_ENABLED -DVBAT_MONITOR_ENABLED -DFLUENCE_ENABLED -DAFE_PROXY_ENABLED -DKPI_OPTIMIZE_ENABLED -DFM_POWER_OPT -DHFP_ENABLED -DCUSTOM_STEREO_ENABLED -DMULTI_VOICE_SESSION_ENABLED -DCOMPRESS_VOIP_ENABLED -DAUDIO_EXTN_FORMATS_ENABLED -DSPKR_PROT_ENABLED -DHW_VARIANTS_ENABLED -DFLAC_OFFLOAD_ENABLED -DCOMPRESS_METADATA_NEEDED -DFLAC_OFFLOAD_ENABLED -DCOMPRESS_METADATA_NEEDED -DVORBIS_OFFLOAD_ENABLED -DCOMPRESS_METADATA_NEEDED -DWMA_OFFLOAD_ENABLED -DCOMPRESS_METADATA_NEEDED -DALAC_OFFLOAD_ENABLED -DCOMPRESS_METADATA_NEEDED -DAPE_OFFLOAD_ENABLED -DCOMPRESS_METADATA_NEEDED -DPCM_OFFLOAD_ENABLED_24 -DDEV_ARBI_ENABLED -DDOLBY_ACDB_LICENSE -DDS2_DOLBY_DAP_ENABLED -DDS1_DOLBY_DDP_ENABLED -DSOURCE_TRACKING_ENABLED -DAUDIO_EXTERNAL_HDMI_ENABLED -DSOUND_TRIGGER_ENABLED -DSOUND_TRIGGER_PLATFORM_NAME=msm8937 -Wall -Werror -fPIC -D_USING_LIBCXX -Wno-unused-variable -Wno-unused-function -Wno-missing-field-initializers -DANDROID_STRICT -Werror=int-to-pointer-cast -Werror=pointer-to-int-cast -Werror=address-of-temporary -Werror=return-type -MD -MF /home/lineageos/out/target/product/tb8504f/obj_arm/SHARED_LIBRARIES/audio.primary.msm8937_intermediates/audio_extn/utils.d -o /home/lineageos/out/target/product/tb8504f/obj_arm/SHARED_LIBRARIES/audio.primary.msm8937_intermediates/audio_extn/utils.o hardware/qcom/audio-caf/msm8996/hal/audio_extn/utils.c"
hardware/qcom/audio-caf/msm8996/hal/audio_extn/utils.c:1336:14: error: use of undeclared identifier 'SND_AUDIOCODEC_DSD'
id = SND_AUDIOCODEC_DSD;
^
hardware/qcom/audio-caf/msm8996/hal/audio_extn/utils.c:1339:14: error: use of undeclared identifier 'SND_AUDIOCODEC_APTX'
id = SND_AUDIOCODEC_APTX;
^
2 errors generated.
Device tree:= https://github.com/darran-kelinske-fivestars/android_device_lenovo_tb8504f/tree/lineage-15.1
Vendor tree:= https://github.com/darran-kelinske-fivestars/android_vendor_lenovo_tb8504f/tree/lineage-15.1
Kernel source:= https://github.com/darran-kelinske-fivestars/android_kernel_lenovo_tb8504f/tree/lineage-15.1
ROM Source:= https://github.com/LineageOS/android
Command:
source build/envsetup.sh && brunch tb8504f
The issue was that I was missing definitions in the kernel uapi includes. Once I added these definitions, I was able to get passed the build issue. I had imported a kernel from Lenovo that did not include the definitions that the xiami kernel had.
https://github.com/redmidevs/android_kernel_xiaomi_msm8917/commit/b33b025abaf5213ccfe1b5e17f75785163eb696a
#define SND_AUDIOCODEC_DSD ((__u32) 0x00000021)
#define SND_AUDIOCODEC_MAX SND_AUDIOCODEC_DSD
and
https://github.com/redmidevs/android_kernel_xiaomi_msm8917/commit/ae0ff772885768103d03ea01c9084990938f15a5
struct snd_dec_aptx {
__u32 lap;
__u32 uap;
__u32 nap;
};
after macOS 10.14 install + Brew update my dev system is broken.
I am unable to install the mysql gem. When trying to install I get:
$ gem install mysql -v '2.8.1' --source 'http://rubygems.org/'
Building native extensions. This could take a while...
ERROR: Error installing mysql:
ERROR: Failed to build gem native extension.
current directory: /Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/mysql-2.8.1/ext/mysql_api
/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/bin/ruby -r ./siteconf20180926-49343-waujia-0.rb extconf.rb
checking for mysql_ssl_set()... yes
checking for rb_str_set_len()... yes
checking for rb_thread_start_timer()... yes
checking for mysql.h... no
checking for mysql/mysql.h... no
*** extconf.rb failed ***
Could not create Makefile due to some reason, probably lack of
necessary libraries and/or headers. Check the mkmf.log file for more
details. You may need configuration options.
Provided configuration options:
--with-opt-dir
--without-opt-dir
--with-opt-include
--without-opt-include=${opt-dir}/include
--with-opt-lib
--without-opt-lib=${opt-dir}/lib
--with-make-prog
--without-make-prog
--srcdir=.
--curdir
--ruby=/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/bin/ruby
--with-mysql-config
--without-mysql-config
To see why this extension failed to compile, please check the mkmf.log which can be found here:
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/extensions/x86-darwin-14/1.8/mysql-2.8.1/mkmf.log
extconf failed, exit code 1
Gem files will remain installed in /Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/mysql-2.8.1 for inspection.
Results logged to /Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/extensions/x86-darwin-14/1.8/mysql-2.8.1/gem_make.out
the relative mkmf.log is:
have_func: checking for mysql_ssl_set()... -------------------- yes
"/usr/local/bin/gcc-4.9 -o conftest -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -L. -L/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib -L. -L/usr/local/opt/libyaml/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/libksba/lib -L/usr/local/opt/openssl098/lib -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -lruby-static -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -ldl -lobjc "
conftest.c: In function 't':
conftest.c:3:53: error: 'mysql_ssl_set' undeclared (first use in this function)
int t() { void ((*volatile p)()); p = (void ((*)()))mysql_ssl_set; return 0; }
^
conftest.c:3:53: note: each undeclared identifier is reported only once for each function it appears in
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { void ((*volatile p)()); p = (void ((*)()))mysql_ssl_set; return 0; }
/* end */
"/usr/local/bin/gcc-4.9 -o conftest -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -L. -L/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib -L. -L/usr/local/opt/libyaml/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/libksba/lib -L/usr/local/opt/openssl098/lib -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -lruby-static -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -ldl -lobjc "
ld: warning: directory not found for option '-L/usr/local/opt/openssl098/lib'
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { mysql_ssl_set(); return 0; }
/* end */
--------------------
have_func: checking for rb_str_set_len()... -------------------- yes
"/usr/local/bin/gcc-4.9 -o conftest -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -L. -L/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib -L. -L/usr/local/opt/libyaml/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/libksba/lib -L/usr/local/opt/openssl098/lib -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -lruby-static -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -ldl -lobjc "
conftest.c: In function 't':
conftest.c:3:53: error: 'rb_str_set_len' undeclared (first use in this function)
int t() { void ((*volatile p)()); p = (void ((*)()))rb_str_set_len; return 0; }
^
conftest.c:3:53: note: each undeclared identifier is reported only once for each function it appears in
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { void ((*volatile p)()); p = (void ((*)()))rb_str_set_len; return 0; }
/* end */
"/usr/local/bin/gcc-4.9 -o conftest -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -L. -L/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib -L. -L/usr/local/opt/libyaml/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/libksba/lib -L/usr/local/opt/openssl098/lib -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -lruby-static -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -ldl -lobjc "
ld: warning: directory not found for option '-L/usr/local/opt/openssl098/lib'
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { rb_str_set_len(); return 0; }
/* end */
--------------------
have_func: checking for rb_thread_start_timer()... -------------------- yes
"/usr/local/bin/gcc-4.9 -o conftest -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -L. -L/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib -L. -L/usr/local/opt/libyaml/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/libksba/lib -L/usr/local/opt/openssl098/lib -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -lruby-static -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -ldl -lobjc "
conftest.c: In function 't':
conftest.c:3:53: error: 'rb_thread_start_timer' undeclared (first use in this function)
int t() { void ((*volatile p)()); p = (void ((*)()))rb_thread_start_timer; return 0; }
^
conftest.c:3:53: note: each undeclared identifier is reported only once for each function it appears in
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { void ((*volatile p)()); p = (void ((*)()))rb_thread_start_timer; return 0; }
/* end */
"/usr/local/bin/gcc-4.9 -o conftest -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -L. -L/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib -L. -L/usr/local/opt/libyaml/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/libksba/lib -L/usr/local/opt/openssl098/lib -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -lruby-static -L/usr/local/Cellar/mysql/5.7.21/lib -lmysqlclient -lssl -lcrypto -ldl -lobjc "
ld: warning: directory not found for option '-L/usr/local/opt/openssl098/lib'
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { rb_thread_start_timer(); return 0; }
/* end */
--------------------
have_header: checking for mysql.h... -------------------- no
"/usr/local/bin/gcc-4.9 -E -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -o conftest.i"
In file included from conftest.c:1:0:
/usr/local/Cellar/mysql/5.7.21/include/mysql/mysql.h:35:23: fatal error: sys/types.h: No such file or directory
#include <sys/types.h>
^
compilation terminated.
checked program was:
/* begin */
1: #include <mysql.h>
/* end */
--------------------
have_header: checking for mysql/mysql.h... -------------------- no
"/usr/local/bin/gcc-4.9 -E -I. -I/Users/MYACCOUNT/.rvm/rubies/ruby-1.8.7-p374/lib/ruby/1.8/i686-darwin14.4.0 -I. -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -I/usr/local/Cellar/mysql/5.7.21/include/mysql -I/usr/local/opt/libyaml/include -I/usr/local/opt/readline/include -I/usr/local/opt/libksba/include -I/usr/local/opt/openssl098/include -O2 -fno-tree-dce -fno-optimize-sibling-calls -fno-common -pipe -fno-common conftest.c -o conftest.i"
In file included from conftest.c:1:0:
/usr/local/include/mysql/mysql.h:35:23: fatal error: sys/types.h: No such file or directory
#include <sys/types.h>
^
compilation terminated.
checked program was:
/* begin */
1: #include <mysql/mysql.h>
/* end */
--------------------
I have mysql installed via Brew and keep mysql, mysql#5.6 or mysql#5.7 active. Path is set in .bash_profile:
### Customize path for MYSQL
MYSQL=/usr/local/mysql/bin
export PATH=$PATH:$MYSQL
export DYLD_LIBRARY_PATH=/usr/local/mysql/lib:$DYLD_LIBRARY_PATH
When I switch to mysql#5.6 or 5.7 I change the path accordingly.
There appears to be some problem with mysql in general.
While one webapp in Ruby 1.8.7, Rails 3.2.5 with mysql database is running, two other webapps with the same technology stack are unable to either reinstall the mysql gem or connect to the database.
$ rake db:migrate --trace
** Invoke db:migrate (first_time)
** Invoke environment (first_time)
** Execute environment
rake aborted!
Mysql::Error: Table 'dev_WEBPROJECT.safts' doesn't exist: SHOW FULL FIELDS FROM `safts`
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/activerecord-3.2.5/lib/active_record/connection_adapters/abstract_mysql_adapter.rb:243:in `query'
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/activerecord-3.2.5/lib/active_record/connection_adapters/abstract_mysql_adapter.rb:243:in `execute'
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/activerecord-3.2.5/lib/active_record/connection_adapters/abstract_adapter.rb:280:in `log'
.
.
.
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/rake-0.9.6/lib/rake/application.rb:70:in `run'
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/gems/rake-0.9.6/bin/rake:37
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/bin/rake:22:in `load'
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/bin/rake:22
/Users/MYACCOUNT/.rvm/gems/ruby-1.8.7-p374#WEBPROJECT/bin/ruby_executable_hooks:15
Tasks: TOP => db:migrate => environment
Can anyone help?
Mojave changed the location of header files necessary for compiling C extensions. You might need to run the following command to install mysql gem:
sudo installer -pkg /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg -target /
Ref: https://gorails.com/setup/osx/10.14-mojave
Do you have xcode installed? /usr/bin/xcodebuild -version
I want to config the config.mkfile to use the cuda. I modified these options:
USE_CUDA = 1
ADD_LDFLAGS = /usr/local/cuda-8.0/lib64
ADD_CFLAGS = /usr/local/cuda-8.0/lib64
USE_CUDA_PATH = /usr/local/cuda
USE_CUDNN = 1
USE_NVRTC = 1
while I run make -j8, I got the errors below:
cd /home/wanger/MXNet/mxnet/dmlc-core; make libdmlc.a USE_SSE=1 config=/home/wanger/MXNet/mxnet/config.mk; cd /home/wanger/MXNet/mxnet
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/ndarray/ndarray_function_gpu.o src/ndarray/ndarray_function.cu >build/src/ndarray/ndarray_function_gpu.d
make[1]: Entering directory '/home/wanger/MXNet/mxnet/dmlc-core'
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/optimizer/sgd_gpu.o src/optimizer/sgd.cu >build/src/optimizer/sgd_gpu.d
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/operator/convolution_gpu.o src/operator/convolution.cu >build/src/operator/convolution_gpu.d
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/operator/svm_output_gpu.o src/operator/svm_output.cu >build/src/operator/svm_output_gpu.d
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/operator/leaky_relu_gpu.o src/operator/leaky_relu.cu >build/src/operator/leaky_relu_gpu.d
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/operator/lrn_gpu.o src/operator/lrn.cu >build/src/operator/lrn_gpu.d
/usr/local/cuda /bin/nvcc -std=c++11 -Xcompiler -D_FORCE_INLINES -g -O3 -ccbin g++ -Xcompiler "-DMSHADOW_FORCE_STREAM -Wall -O3 -I/home/wanger/MXNet/mxnet/mshadow/ -I/home/wanger/MXNet/mxnet/dmlc-core/include -fPIC -Iinclude -funroll-loops -Wno-unused-parameter -Wno-unknown-pragmas -msse3 -I/usr/local/cuda /include -DMSHADOW_USE_CBLAS=1 -DMSHADOW_USE_MKL=0 -DMSHADOW_RABIT_PS=0 -DMSHADOW_DIST_PS=0 -DMSDHADOW_USE_PASCAL=0 -DMXNET_USE_OPENCV=1 `pkg-config --cflags opencv` -fopenmp -DMSHADOW_USE_CUDNN=1 /usr/local/cuda-8.0/lib64 -DMXNET_USE_NVRTC=1" -M -MT build/src/operator/fully_connected_gpu.o src/operator/fully_connected.cu >build/src/operator/fully_connected_gpu.d
/bin/sh: 1: /usr/local/cuda: Permission denied
Makefile:184: recipe for target 'build/src/ndarray/ndarray_function_gpu.o' failed
make: *** [build/src/ndarray/ndarray_function_gpu.o] Error 126
make: *** Waiting for unfinished jobs....
/bin/sh: 1: /usr/local/cuda: Permission denied
/bin/sh: 1: /usr/local/cuda: Permission denied
Makefile:184: recipe for target 'build/src/optimizer/sgd_gpu.o' failed
make: *** [build/src/optimizer/sgd_gpu.o] Error 126
Makefile:184: recipe for target 'build/src/operator/convolution_gpu.o' failed
make: *** [build/src/operator/convolution_gpu.o] Error 126
/bin/sh: 1: /usr/local/cuda: Permission denied
/bin/sh: 1: /usr/local/cuda: Permission denied
Makefile:184: recipe for target 'build/src/operator/svm_output_gpu.o' failed
make: *** [build/src/operator/svm_output_gpu.o] Error 126
Makefile:184: recipe for target 'build/src/operator/lrn_gpu.o' failed
make: *** [build/src/operator/lrn_gpu.o] Error 126
/bin/sh: 1: /usr/local/cuda: Permission denied
Makefile:184: recipe for target 'build/src/operator/fully_connected_gpu.o' failed
make: *** [build/src/operator/fully_connected_gpu.o] Error 126
make[1]: 'libdmlc.a' is up to date.
make[1]: Leaving directory '/home/wanger/MXNet/mxnet/dmlc-core'
/bin/sh: 1: /usr/local/cuda: Permission denied
Makefile:184: recipe for target 'build/src/operator/leaky_relu_gpu.o' failed
make: *** [build/src/operator/leaky_relu_gpu.o] Error 126
I think #Marco spotted it: You have defined USE_CUDA_PATH with a trailing space, so it's trying to execute the directory as the compiler, which is causing the "permission denied" error because it can't execute the directory.
I tried to install oj ruby gem
gem install oj -v '1.3.5'
Here's the output log
C:/Ruby192/bin/ruby.exe extconf.rb
Creating Makefile for ruby version 1.9.2 <<<<<
creating Makefile
make
C:/Ruby192/bin/ruby -e "puts 'EXPORTS', 'Init_oj'" > oj-i386-mingw32.def
gcc -I. -IC:/Ruby192/include/ruby-1.9.1/i386-mingw32 -I/C/Ruby192/include/ruby-1.9.1/ruby/backward -I/C/Ruby192/include/ruby-1.9.1 -I. -DRUBY_TYPE=ruby -DRUBY_RUBY -DRUBY_VERSION=1.9.2 -DRUBY_VERSION_MAJOR=1 -DRUBY_VERSION_MINOR=9 -DRUBY_VERSION_MICRO=2 -DHAS_RB_TIME_TIMESPEC=0 -DHAS_ENCODING_SUPPORT=1 -DHAS_NANO_TIME=1 -DHAS_RSTRUCT=1 -DHAS_IVAR_HELPERS=1 -DHAS_EXCEPTION_MAGIC=0 -DHAS_PROC_WITH_BLOCK=1 -DHAS_TOP_LEVEL_ST_H=0 -DSAFE_CACHE -Wall -O3 -g -Wextra -Wno-unused-parameter -Wno-parentheses -Wpointer-arith -Wwrite-strings -Wno-missing-field-initializers -Wno-long-long -o cache.o -c cache.c
cache.c: In function 'oj_cache_new':
cache.c:54:5: warning: implicit declaration of function 'bzero'
cache.c:54:5: warning: incompatible implicit declaration of built-in function 'bzero'
gcc -I. -IC:/Ruby192/include/ruby-1.9.1/i386-mingw32 -I/C/Ruby192/include/ruby-1.9.1/ruby/backward -I/C/Ruby192/include/ruby-1.9.1 -I. -DRUBY_TYPE=ruby -DRUBY_RUBY -DRUBY_VERSION=1.9.2 -DRUBY_VERSION_MAJOR=1 -DRUBY_VERSION_MINOR=9 -DRUBY_VERSION_MICRO=2 -DHAS_RB_TIME_TIMESPEC=0 -DHAS_ENCODING_SUPPORT=1 -DHAS_NANO_TIME=1 -DHAS_RSTRUCT=1 -DHAS_IVAR_HELPERS=1 -DHAS_EXCEPTION_MAGIC=0 -DHAS_PROC_WITH_BLOCK=1 -DHAS_TOP_LEVEL_ST_H=0 -DSAFE_CACHE -Wall -O3 -g -Wextra -Wno-unused-parameter -Wno-parentheses -Wpointer-arith -Wwrite-strings -Wno-missing-field-initializers -Wno-long-long -o cache8.o -c cache8.c
gcc -I. -IC:/Ruby192/include/ruby-1.9.1/i386-mingw32 -I/C/Ruby192/include/ruby-1.9.1/ruby/backward -I/C/Ruby192/include/ruby-1.9.1 -I. -DRUBY_TYPE=ruby -DRUBY_RUBY -DRUBY_VERSION=1.9.2 -DRUBY_VERSION_MAJOR=1 -DRUBY_VERSION_MINOR=9 -DRUBY_VERSION_MICRO=2 -DHAS_RB_TIME_TIMESPEC=0 -DHAS_ENCODING_SUPPORT=1 -DHAS_NANO_TIME=1 -DHAS_RSTRUCT=1 -DHAS_IVAR_HELPERS=1 -DHAS_EXCEPTION_MAGIC=0 -DHAS_PROC_WITH_BLOCK=1 -DHAS_TOP_LEVEL_ST_H=0 -DSAFE_CACHE -Wall -O3 -g -Wextra -Wno-unused-parameter -Wno-parentheses -Wpointer-arith -Wwrite-strings -Wno-missing-field-initializers -Wno-long-long -o dump.o -c dump.c
In file included from c:/Ruby192/include/ruby-1.9.1/ruby/defines.h:205:0,
from c:/Ruby192/include/ruby-1.9.1/ruby/ruby.h:74,
from c:/Ruby192/include/ruby-1.9.1/ruby.h:32,
from oj.h:43,
from dump.c:39:
c:/Ruby192/include/ruby-1.9.1/ruby/win32.h:272:12: error: conflicting types for 'gettimeofday'
c:\devkit\mingw\bin\../lib/gcc/mingw32/4.5.2/../../../../include/sys/time.h:39:29: note: previous declaration of 'gettimeofday' was here
In file included from c:/Ruby192/include/ruby-1.9.1/ruby/ruby.h:1326:0,
from c:/Ruby192/include/ruby-1.9.1/ruby.h:32,
from oj.h:43,
from dump.c:39:
c:/Ruby192/include/ruby-1.9.1/ruby/missing.h:42:8: error: redefinition of 'struct timezone'
c:\devkit\mingw\bin\../lib/gcc/mingw32/4.5.2/../../../../include/sys/time.h:26:8: note: originally defined here
In file included from dump.c:39:0:
oj.h:50:21: fatal error: pthread.h: No such file or directory
compilation terminated.
make: *** [dump.o] Error 1
I am running windows 7 x64, ruby 1.92, rails 3.1.
Any idea how can I install the oj gem?
Thanks
New release from OJ fixed the windows problems.
I installed OJ 1.4.3
since two days I'm facing a problem I can't solve. I'm trying to install redmine on a debian machine. When it comes to installation for the gem mysql it fails. I don't know what to do anymore. My last instance is your help.
Error
root#host:~# gem1.8 install mysql
Building native extensions. This could take a while...
ERROR: Error installing mysql:
ERROR: Failed to build gem native extension.
/usr/bin/ruby1.8 extconf.rb
checking for mysql_ssl_set()... no
checking for rb_str_set_len()... no
checking for rb_thread_start_timer()... no
checking for mysql.h... no
checking for mysql/mysql.h... no
*** extconf.rb failed ***
Could not create Makefile due to some reason, probably lack of
necessary libraries and/or headers. Check the mkmf.log file for more
details. You may need configuration options.
Provided configuration options:
--with-opt-dir
--without-opt-dir
--with-opt-include
--without-opt-include=${opt-dir}/include
--with-opt-lib
--without-opt-lib=${opt-dir}/lib
--with-make-prog
--without-make-prog
--srcdir=.
--curdir
--ruby=/usr/bin/ruby1.8
--with-mysql-config
--without-mysql-config
Gem files will remain installed in /usr/lib/ruby/gems/1.8/gems/mysql-2.8.1 for inspection.
Results logged to /usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api/gem_make.out
What I've tried
Installing packages by instruction: http://wiki.rubyonrails.org/database-support/mysql#linux_ubuntu
installing with mysql_config parameter
root#host:~# find / -name mysql_config
/usr/bin/mysql_config
root#host:~# gem1.8 install mysql -- --with-mysql-config=/usr/bin/mysql_config
System
user#host:~# uname -a
Linux www.example.org 2.6.18-028stab070.4 #1 SMP Tue Aug 17 18:32:47 MSD 2010 x86_64 GNU/Linux
root#s15428277:~# aptitude search '~i (mysql|ruby)|mysql.*dev'
i A libdbd-mysql-perl - A Perl5 database interface to the MySQL database
p libghc6-hsql-mysql-dev - Multi-Database Interface System for Haskell
p libgnademysql-dev - GNat Ada Database Environment - MySQL programming interface
p liblua5.1-sql-mysql-dev - luasql development files for the lua language version 5.1
i libmysql++-dev - mysql C++ library bindings (development)
i A libmysql++2c2a - mysql C++ library bindings (runtime)
p libmysql-ocaml-dev - OCaml bindings for MySql
v libmysqlclient-dev -
i libmysqlclient15-dev - MySQL database development files
i A libmysqlclient15off - MySQL database client library
i libopenssl-ruby1.8 - OpenSSL interface for Ruby 1.8
i A libreadline-ruby1.8 - Readline interface for Ruby 1.8
i A libruby1.8 - Libraries necessary to run Ruby 1.8
i libsqlite3-ruby1.8 - SQLite3 interface for Ruby 1.8
i A mysql-client-5.0 - MySQL database client binaries
i A mysql-common - MySQL database common files
i mysql-server - MySQL database server (metapackage depending on the latest version)
i A mysql-server-5.0 - MySQL database server binaries
i ruby1.8 - Interpreter of object-oriented scripting language Ruby 1.8
i ruby1.8-dev - Header files for compiling extension modules for the Ruby 1.8
root#host:~# gem1.8 --version
1.3.7
root#host:~# ruby1.8 --version
ruby 1.8.7 (2008-08-11 patchlevel 72) [x86_64-linux]
Files
mkmf.log
have_func: checking for mysql_ssl_set()... -------------------- no
"cc -o conftest -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -L. -L/usr/lib -L. -rdynamic -Wl,-export-dynamic -L/usr/lib/mysql -lmysqlclient -lruby1.8-static -L/usr/lib/mysql -lmysqlclient -lpthread -ldl -lcrypt -lm -lc"
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { void ((*volatile p)()); p = (void ((*)()))mysql_ssl_set; return 0; }
/* end */
"cc -o conftest -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -L. -L/usr/lib -L. -rdynamic -Wl,-export-dynamic -L/usr/lib/mysql -lmysqlclient -lruby1.8-static -L/usr/lib/mysql -lmysqlclient -lpthread -ldl -lcrypt -lm -lc"
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { mysql_ssl_set(); return 0; }
/* end */
--------------------
have_func: checking for rb_str_set_len()... -------------------- no
"cc -o conftest -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -L. -L/usr/lib -L. -rdynamic -Wl,-export-dynamic -L/usr/lib/mysql -lmysqlclient -lruby1.8-static -L/usr/lib/mysql -lmysqlclient -lpthread -ldl -lcrypt -lm -lc"
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { void ((*volatile p)()); p = (void ((*)()))rb_str_set_len; return 0; }
/* end */
"cc -o conftest -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -L. -L/usr/lib -L. -rdynamic -Wl,-export-dynamic -L/usr/lib/mysql -lmysqlclient -lruby1.8-static -L/usr/lib/mysql -lmysqlclient -lpthread -ldl -lcrypt -lm -lc"
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { rb_str_set_len(); return 0; }
/* end */
--------------------
have_func: checking for rb_thread_start_timer()... -------------------- no
"cc -o conftest -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -L. -L/usr/lib -L. -rdynamic -Wl,-export-dynamic -L/usr/lib/mysql -lmysqlclient -lruby1.8-static -L/usr/lib/mysql -lmysqlclient -lpthread -ldl -lcrypt -lm -lc"
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { void ((*volatile p)()); p = (void ((*)()))rb_thread_start_timer; return 0; }
/* end */
"cc -o conftest -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -L. -L/usr/lib -L. -rdynamic -Wl,-export-dynamic -L/usr/lib/mysql -lmysqlclient -lruby1.8-static -L/usr/lib/mysql -lmysqlclient -lpthread -ldl -lcrypt -lm -lc"
checked program was:
/* begin */
1: /*top*/
2: int main() { return 0; }
3: int t() { rb_thread_start_timer(); return 0; }
/* end */
--------------------
have_header: checking for mysql.h... -------------------- no
"cc -E -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -o conftest.i"
checked program was:
/* begin */
1: #include
/* end */
--------------------
have_header: checking for mysql/mysql.h... -------------------- no
"cc -E -I. -I/usr/lib/ruby/1.8/x86_64-linux -I/usr/lib/ruby/gems/1.8/gems/mysql-2.8.1/ext/mysql_api -I/usr/include/mysql -DBIG_JOINS=1 -fPIC -fno-strict-aliasing -g -g -O2 -fPIC conftest.c -o conftest.i"
checked program was:
/* begin */
1: #include
/* end */
--------------------
It looks like you are on the right track. Even though you appear to have the mysql libraries installed, you need to ensure that the MySQL development header files and their dependencies are fully installed in order for the MySQL gem to be compiled.
Try:
sudo apt-get install mysql-dev
And then:
sudo gem install mysql --
--with-mysql-config=/usr/local/mysql/bin/mysql_config
Clearly, the exact command depends upon where the mysql-dev files are installed.
I had the same problem.
The solution for me was to install ruby-dev.
Maybe it helps somebody else, I see you've already solved your porblem.