Can't start MYSQL server it keeps saying "server quit without updating PID file". I tried re-creating the PID file, I added the path to PID file in my.cmf file, but nothing seems to help. I tried renaming the PID file and then starting up and it seemed to start up but then it died right away.
Here's the mysql log:
2015-07-24 15:27:27 1992 [Note] Plugin 'FEDERATED' is disabled.
2015-07-24 15:27:27 1992 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-07-24 15:27:27 1992 [Note] InnoDB: The InnoDB memory heap is disabled
2015-07-24 15:27:27 1992 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-07-24 15:27:27 1992 [Note] InnoDB: Memory barrier is not used
2015-07-24 15:27:27 1992 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-07-24 15:27:27 1992 [Note] InnoDB: Using Linux native AIO
2015-07-24 15:27:27 1992 [Note] InnoDB: Using CPU crc32 instructions
2015-07-24 15:27:27 1992 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-07-24 15:27:27 1992 [Note] InnoDB: Completed initialization of buffer pool
2015-07-24 15:27:27 1992 [Note] InnoDB: Highest supported file format is Barracuda.
2015-07-24 15:27:27 1992 [Note] InnoDB: The log sequence numbers 92864584624 and 92864584624 in ibdata files do not match the l$
2015-07-24 15:27:27 1992 [Note] InnoDB: Database was not shutdown normally!
2015-07-24 15:27:27 1992 [Note] InnoDB: Starting crash recovery.
2015-07-24 15:27:27 1992 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-07-24 15:27:27 1992 [Note] InnoDB: Restoring possible half-written data pages
2015-07-24 15:27:27 1992 [Note] InnoDB: from the doublewrite buffer...
2015-07-24 15:27:28 1992 [Note] InnoDB: 128 rollback segment(s) are active.
2015-07-24 15:27:28 1992 [Note] InnoDB: Waiting for purge to start
2015-07-24 15:27:28 1992 [Note] InnoDB: 5.6.23 started; log sequence number 92864702613
2015-07-24 15:27:28 1992 [Note] Server hostname (bind-address): '*'; port: 3306
2015-07-24 15:27:28 1992 [Note] IPv6 is not available.
2015-07-24 15:27:28 1992 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-07-24 15:27:28 1992 [Note] Server socket created on IP: '0.0.0.0'.
2015-07-24 15:27:28 1992 [Note] Event Scheduler: Loaded 0 events
2015-07-24 15:27:28 1992 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23-log' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
150724 15:27:28 mysqld_safe Number of processes running now: 0
150724 15:27:28 mysqld_safe mysqld restarted
2015-07-24 15:27:28 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timesta$
2015-07-24 15:27:28 2035 [Note] Plugin 'FEDERATED' is disabled.
2015-07-24 15:27:28 2035 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-07-24 15:27:28 2035 [Note] InnoDB: The InnoDB memory heap is disabled
2015-07-24 15:27:28 2035 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-07-24 15:27:28 2035 [Note] InnoDB: Memory barrier is not used
2015-07-24 15:27:28 2035 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-07-24 15:27:28 2035 [Note] InnoDB: Using Linux native AIO
2015-07-24 15:27:28 2035 [Note] InnoDB: Using CPU crc32 instructions
2015-07-24 15:27:28 2035 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-07-24 15:27:28 2035 [Note] InnoDB: Completed initialization of buffer pool
150724 15:27:28 mysqld_safe mysqld from pid file /var/run/mysqld/mysqld.pid ended
Here's what's in my my.cmf file.
[mysqld]
max_connections=500
slow_query_log=1
default-storage-engine=MyISAM
innodb_file_per_table=1
max_allowed_packet=268435456
open_files_limit=10000
log-error=/var/log/mysqld.log
pid-file=/var/run/mysqld/mysqld.pid
Any ideas what might be a problem?
Try following
1) Ensure MySQL has write permission on PID file
1) Go to MySQL data directory remove ibdata files (dont forget to take backup)
Related
Multisite mysql getting crashed multiples times.
AH01071: Got error 'PHP message: PHP Warning: mysqli_query(): MySQL server has gone away in /home/xxxxxxxx/www/wp-includes/wp-db.php on line 1925
PHP message: PHP Warning: mysqli_query(): Error reading result set's header in /home/xxxxxxxx/www/wp-includes/wp-db.php on line 1925
PHP message: PHP Warning: mysqli_real_connect(): (HY000/2002): Connection refused in /home/xxxxxxxx/www/wp-includes/wp-db.php on line 1531'
I don't find anything suspicious in the log
2020-02-06 6:18:28 140544489782656 [Note] Using unique option prefix 'myisam-recover' is error-prone and can break in the future. Please use the full name 'myisam-recover-options' instead.
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Using mutexes to ref count buffer pool pages
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: The InnoDB memory heap is disabled
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: GCC builtin __atomic_thread_fence() is used for memory barrier
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Compressed tables use zlib 1.2.8
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Using Linux native AIO
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Using SSE crc32 instructions
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Initializing buffer pool, size = 2.9G
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Completed initialization of buffer pool
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Highest supported file format is Barracuda.
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Starting crash recovery from checkpoint LSN=795526465769
2020-02-06 6:18:28 140544489782656 [Note] InnoDB: Restoring possible half-written data pages from the doublewrite buffer...
2020-02-06 6:18:29 140544489782656 [Note] InnoDB: Starting final batch to recover 11 pages from redo log
InnoDB: Last MySQL binlog file position 0 67151849, file name ./mysql-bin.007416
2020-02-06 6:18:29 140544489782656 [Note] InnoDB: 128 rollback segment(s) are active.
2020-02-06 6:18:29 140544489782656 [Note] InnoDB: Waiting for purge to start
2020-02-06 6:18:29 140544489782656 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.36-82.1 started; log sequence number 795526513845
2020-02-06 6:18:30 140539223574272 [Note] InnoDB: Dumping buffer pool(s) not yet started
2020-02-06 6:18:30 140544489782656 [Note] Plugin 'FEEDBACK' is disabled.
2020-02-06 6:18:30 140544489782656 [Note] Recovering after a crash using mysql-bin
2020-02-06 6:18:30 140544489782656 [Note] Starting crash recovery...
2020-02-06 6:18:30 140544489782656 [Note] Crash recovery finished.
2020-02-06 6:18:30 140544489782656 [Note] Server socket created on IP: '::'.
2020-02-06 6:18:30 140544489782656 [Note] /usr/sbin/mysqld: ready for connections.
Version: '10.1.26-MariaDB-0+deb9u1' socket: '/var/run/mysqld/mysqld.sock' port: 3306 Debian 9.1
Any help will be appreciated thanks.
How comes this happen? did change anything like prefix of wordpress, changes made to mysql or php version or any changes to server? may be those are the issues. Please provide the related information. Its due to corrupted database.
find wp-db.php and add this line $this->query("set session wait_timeout=300"); after $this->ready = true;
goto wp-config.php and add define('WP_ALLOW_REPAIR', true);
goto https://yourwebsite.com/wp-admin/maint/repair.php and click repair your database
or simply upload old backup
I have been using Xampp to test my website stuff and everything was working perfectly until I decided to install Microsoft SQL SERVER 2017 to do some data science stuff (school stuff).
Now I can still start Apache but I cant start MySQL. Here is the log :
2015-11-10 15:26:56 10fc InnoDB: Warning: Using innodb_additional_mem_pool_size is DEPRECATED. This option may be removed in future releases, together with the option innodb_use_sys_malloc and with the InnoDB's internal memory allocator.
2015-11-10 15:26:56 4348 [Note] InnoDB: Using mutexes to ref count buffer pool pages
2015-11-10 15:26:56 4348 [Note] InnoDB: The InnoDB memory heap is disabled
2015-11-10 15:26:56 4348 [Note] InnoDB: Mutexes and rw_locks use Windows interlocked functions
2015-11-10 15:26:56 4348 [Note] InnoDB: Memory barrier is not used
2015-11-10 15:26:56 4348 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-11-10 15:26:56 4348 [Note] InnoDB: Not using CPU crc32 instructions
2015-11-10 15:26:56 4348 [Note] InnoDB: Initializing buffer pool, size = 16.0M
2015-11-10 15:26:56 4348 [Note] InnoDB: Completed initialization of buffer pool
2015-11-10 15:26:56 4348 [Note] InnoDB: Highest supported file format is Barracuda.
2015-11-10 15:26:57 4348 [Note] InnoDB: 128 rollback segment(s) are active.
2015-11-10 15:26:57 4348 [Note] InnoDB: Waiting for purge to start
2015-11-10 15:26:57 4348 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.26-74.0 started; log sequence number 1835027
2015-11-10 15:26:57 6140 [Note] InnoDB: Dumping buffer pool(s) not yet started
2015-11-10 15:26:57 4348 [Note] Plugin 'FEEDBACK' is disabled.
2015-11-10 15:26:57 4348 [Note] Server socket created on IP: '::'.
2015-11-10 15:26:57 4348 [Note] Event Scheduler: Loaded 0 events
2015-11-10 15:26:57 4348 [Note] C:\xampp\mysql\bin\mysqld.exe: ready for connections.
Version: '10.1.8-MariaDB' socket: '' port: 3306 mariadb.org binary distribution
2015-11-10 15:27:11 5152 [Note] C:\xampp\mysql\bin\mysqld.exe: Normal shutdown
2015-11-10 15:27:11 5152 [Note] Event Scheduler: Purging the queue. 0 events
2015-11-10 15:27:11 5732 [Note] InnoDB: FTS optimize thread exiting.
2015-11-10 15:27:11 5152 [Note] InnoDB: Starting shutdown...
2015-11-10 15:27:13 5152 [Note] InnoDB: Shutdown completed; log sequence number 1835037
2015-11-10 15:27:13 5152 [Note] C:\xampp\mysql\bin\mysqld.exe: Shutdown complete
2017-11-17 13:40:05 33f8 InnoDB: Warning: Using innodb_additional_mem_pool_size is DEPRECATED. This option may be removed in future releases, together with the option innodb_use_sys_malloc and with the InnoDB's internal memory allocator.
2017-11-17 13:40:05 13304 [Note] InnoDB: innodb_empty_free_list_algorithm has been changed to legacy because of small buffer pool size. In order to use backoff, increase buffer pool at least up to 20MB.
2017-11-17 13:40:05 13304 [Note] InnoDB: Using mutexes to ref count buffer pool pages
2017-11-17 13:40:05 13304 [Note] InnoDB: The InnoDB memory heap is disabled
2017-11-17 13:40:05 13304 [Note] InnoDB: Mutexes and rw_locks use Windows interlocked functions
2017-11-17 13:40:05 13304 [Note] InnoDB: _mm_lfence() and _mm_sfence() are used for memory barrier
2017-11-17 13:40:05 13304 [Note] InnoDB: Compressed tables use zlib 1.2.3
2017-11-17 13:40:05 13304 [Note] InnoDB: Using generic crc32 instructions
2017-11-17 13:40:05 13304 [Note] InnoDB: Initializing buffer pool, size = 16.0M
2017-11-17 13:40:05 13304 [Note] InnoDB: Completed initialization of buffer pool
2017-11-17 13:40:05 13304 [Note] InnoDB: Highest supported file format is Barracuda.
2017-11-17 13:40:06 13304 [Note] InnoDB: 128 rollback segment(s) are active.
2017-11-17 13:40:06 13304 [Note] InnoDB: Waiting for purge to start
2017-11-17 13:40:06 13304 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.36-82.2 started; log sequence number 1835037
2017-11-17 13:40:06 13284 [Note] InnoDB: Dumping buffer pool(s) not yet started
2017-11-17 13:40:06 13304 [Note] Plugin 'FEEDBACK' is disabled.
2017-11-17 13:40:06 13304 [Note] Server socket created on IP: '::'.
2017-11-17 13:40:06 13304 [ERROR] Can't start server: Bind on TCP/IP port. Got error: 10048: Only one usage of each socket address (protocol/network address/port) is normally permitted.
2017-11-17 13:40:06 13304 [ERROR] Do you already have another mysqld server running on port: 3306 ?
2017-11-17 13:40:06 13304 [ERROR] Aborting
I tried shutting down the SQL Server using SQL Server Management but I still can't connect MySQL.
You can change port of sql server or mysql server and dont forget to specify the port while accessing it.
Since Microsoft SQL Server and MySQL/MariaDB/Percona use different ports (and it doesn't sound like you've changed from the defaults), I doubt this is related to you installing SQL Server. SQL Server uses port 1433 and MySQL port 3306.
As for what is using that port, https://stackoverflow.com/a/48199/2385479 helps us. There is a suggestion for the TCPView Sysinternals application or the alternate suggestion of using netstat (such as C:\> netstat -a -b -n) which should give you some idea of what's using port 3306.
It seems to me you probably have another MySQL server installed which is conflicting with the port XAMPP is trying to use.
As in the log, when you installed the SQL Server it "reserverd" the same port that your MySQL was using
2017-11-17 13:40:06 13304 [ERROR] Do you already have another mysqld server running on port: 3306 ?
You can change the MySql port in the my.ini file, which can be acessed by the Xampp Control Panel, under "config".
Or, you can change de SQL Server Port, following this tutorial: https://www.syskit.com/blog/change-sql-server-port/
I open the XAMPP (7.0.23) Control Panel (v.3.2.2) and start Apache and MySql. Apache connects immediately, but MySql takes a long time to display the port (3306) on the panel and start the connection. I already changed the MySql port for others but it did not work. I've also reinstalled XAMPP twice without success.
Using Win 10.
Follow the log:
2017-09-22 8:59:11 9704 [Note] InnoDB: Using mutexes to ref count
buffer pool pages
2017-09-22 8:59:11 9704 [Note] InnoDB: The InnoDB memory heap is
disabled
2017-09-22 8:59:11 9704 [Note] InnoDB: Mutexes and rw_locks use
Windows interlocked functions
2017-09-22 8:59:11 9704 [Note] InnoDB: _mm_lfence() and _mm_sfence()
are used for memory barrier
2017-09-22 8:59:11 9704 [Note] InnoDB: Compressed tables use zlib
1.2.3
2017-09-22 8:59:11 9704 [Note] InnoDB: Using generic crc32
instructions
2017-09-22 8:59:11 9704 [Note] InnoDB: Initializing buffer pool, size
= 16.0M
2017-09-22 8:59:11 9704 [Note] InnoDB: Completed initialization of
buffer pool
2017-09-22 8:59:11 9704 [Note] InnoDB: Highest supported file format
is Barracuda.
2017-09-22 8:59:12 9704 [Note] InnoDB: The log sequence number
1835037 in ibdata file do not match the log sequence number 131851166
in the ib_logfiles!
2017-09-22 8:59:28 9704 [Note] InnoDB: Processed 1298 .ibd/.isl files
2017-09-22 8:59:35 9704 [Note] InnoDB: Restoring possible
half-written data pages from the doublewrite buffer...
2017-09-22 8:59:36 9704 [Note] InnoDB: Read redo log up to
LSN=131851264
2017-09-22 9:00:01 9704 [Note] InnoDB: 128 rollback segment(s) are
active.
2017-09-22 9:00:01 9704 [Note] InnoDB: Waiting for purge to start
2017-09-22 9:00:01 9704 [Note] InnoDB: Percona XtraDB
(http://www.percona.com) 5.6.36-82.1 started; log sequence number
131851166
2017-09-22 9:00:01 10900 [Note] InnoDB: Dumping buffer pool(s) not
yet started 2017-09-22 9:00:01 9704 [Note] Plugin 'FEEDBACK' is
disabled.
2017-09-22 9:00:01 9704 [Note] Server socket created on IP: '::'.
2017-09-22 9:00:02 9704 [Note] c:\xampp\mysql\bin\mysqld.exe: ready
for connections.
Version: '10.1.26-MariaDB' socket: '' port: 3306 mariadb.org binary
distribution
Tks.
I recently started a project and I used a large table to import on phpmyadmin. After I changed the sizes from php.ini, I tried to connect to phpmyadmin,but Unable to connect error appeared. Here is the recent log:
2016-07-05 22:22:39 5052 [Note] Event Scheduler: Purging the queue. 0 events
2016-07-05 22:22:40 5676 [Note] InnoDB: FTS optimize thread exiting.
2016-07-05 22:22:40 5052 [Note] InnoDB: Starting shutdown...
2016-07-05 22:22:42 5052 [Note] InnoDB: Shutdown completed; log sequence number 4456833
2016-07-05 22:22:42 5052 [Note] c:\xampp\mysql\bin\mysqld.exe: Shutdown complete
2016-07-05 22:25:13 1464 InnoDB: Warning: Using innodb_additional_mem_pool_size is DEPRECATED. This option may be removed in future releases, together with the option innodb_use_sys_malloc and with the InnoDB's internal memory allocator.
2016-07-05 22:25:13 5220 [Note] InnoDB: Using mutexes to ref count buffer pool pages
2016-07-05 22:25:13 5220 [Note] InnoDB: The InnoDB memory heap is disabled
2016-07-05 22:25:13 5220 [Note] InnoDB: Mutexes and rw_locks use Windows interlocked functions
2016-07-05 22:25:13 5220 [Note] InnoDB: Memory barrier is not used
2016-07-05 22:25:13 5220 [Note] InnoDB: Compressed tables use zlib 1.2.3
2016-07-05 22:25:13 5220 [Note] InnoDB: Not using CPU crc32 instructions
2016-07-05 22:25:13 5220 [Note] InnoDB: Initializing buffer pool, size = 16.0M
2016-07-05 22:25:13 5220 [Note] InnoDB: Completed initialization of buffer pool
2016-07-05 22:25:13 5220 [Note] InnoDB: Highest supported file format is Barracuda.
2016-07-05 22:25:14 5220 [Note] InnoDB: 128 rollback segment(s) are active.
2016-07-05 22:25:14 5220 [Note] InnoDB: Waiting for purge to start
2016-07-05 22:25:14 5220 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.26-74.0 started; log sequence number 4456833
2016-07-05 22:25:14 2732 [Note] InnoDB: Dumping buffer pool(s) not yet started
2016-07-05 22:25:14 5220 [Note] Plugin 'FEEDBACK' is disabled.
2016-07-05 22:25:14 5220 [Note] Server socket created on IP: '::'.
2016-07-05 22:25:14 5220 [Note] c:\xampp\mysql\bin\mysqld.exe: ready for connections.
Version: '10.1.9-MariaDB' socket: '' port: 3306 mariadb.org binary distribution
2016-07-05 22:27:32 2344 [Note] c:\xampp\mysql\bin\mysqld.exe: Normal shutdown
2016-07-05 22:27:32 2344 [Note] Event Scheduler: Purging the queue. 0 events
2016-07-05 22:27:32 1160 [Note] InnoDB: FTS optimize thread exiting.
2016-07-05 22:27:32 2344 [Note] InnoDB: Starting shutdown...
2016-07-05 22:27:33 2344 [Note] InnoDB: Shutdown completed; log sequence number 4456843
2016-07-05 22:27:33 2344 [Note] c:\xampp\mysql\bin\mysqld.exe: Shutdown complete
2016-07-05 22:27:42 12fc InnoDB: Warning: Using innodb_additional_mem_pool_size is DEPRECATED. This option may be removed in future releases, together with the option innodb_use_sys_malloc and with the InnoDB's internal memory allocator.
2016-07-05 22:27:42 4860 [Note] InnoDB: Using mutexes to ref count buffer pool pages
2016-07-05 22:27:42 4860 [Note] InnoDB: The InnoDB memory heap is disabled
2016-07-05 22:27:42 4860 [Note] InnoDB: Mutexes and rw_locks use Windows interlocked functions
2016-07-05 22:27:42 4860 [Note] InnoDB: Memory barrier is not used
2016-07-05 22:27:42 4860 [Note] InnoDB: Compressed tables use zlib 1.2.3
2016-07-05 22:27:42 4860 [Note] InnoDB: Not using CPU crc32 instructions
2016-07-05 22:27:42 4860 [Note] InnoDB: Initializing buffer pool, size = 16.0M
2016-07-05 22:27:42 4860 [Note] InnoDB: Completed initialization of buffer pool
2016-07-05 22:27:42 4860 [Note] InnoDB: Highest supported file format is Barracuda.
2016-07-05 22:27:43 4860 [Note] InnoDB: 128 rollback segment(s) are active.
2016-07-05 22:27:43 4860 [Note] InnoDB: Waiting for purge to start
2016-07-05 22:27:43 4860 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.26-74.0 started; log sequence number 4456843
2016-07-05 22:27:43 3052 [Note] InnoDB: Dumping buffer pool(s) not yet started
2016-07-05 22:27:43 4860 [Note] Plugin 'FEEDBACK' is disabled.
2016-07-05 22:27:43 4860 [Note] Server socket created on IP: '::'.
2016-07-05 22:27:44 4860 [Note] c:\xampp\mysql\bin\mysqld.exe: ready for connections.
If someone could explain me what should I do,it would be great.
Actually, the problem was that I had the Antivirus running. Apparently it conflicted with XAMPP.
I noticed in WHM that MySQL 5.5 has an EOL December of 15' and I upgraded to 5.6 and now MySQL crashes at least twice a day, but it restarts after failing.
Here is a sampling of the error log.
Any idea what is going on?
Thank you.
8/23/15
Here is another sampling of the error log.
InnoDB: Doing recovery: scanned up to log sequence number 579981897
2015-08-21 20:58:00 9080 [Note] InnoDB: 128 rollback segment(s) are active.
2015-08-21 20:58:00 9080 [Note] InnoDB: Waiting for purge to start
2015-08-21 20:58:00 9080 [Note] InnoDB: 5.6.23 started; log sequence number 579981897
2015-08-21 20:58:00 9080 [Note] Server hostname (bind-address): '*'; port: 3306
2015-08-21 20:58:00 9080 [Note] IPv6 is not available.
2015-08-21 20:58:00 9080 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-08-21 20:58:00 9080 [Note] Server socket created on IP: '0.0.0.0'.
2015-08-21 20:58:00 9080 [Note] Event Scheduler: Loaded 0 events
2015-08-21 20:58:00 9080 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
150821 23:25:59 mysqld_safe Number of processes running now: 0
150821 23:25:59 mysqld_safe mysqld restarted
2015-08-21 23:25:59 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2015-08-21 23:25:59 13544 [Note] Plugin 'FEDERATED' is disabled.
2015-08-21 23:25:59 13544 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-08-21 23:25:59 13544 [Note] InnoDB: The InnoDB memory heap is disabled
2015-08-21 23:25:59 13544 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-08-21 23:25:59 13544 [Note] InnoDB: Memory barrier is not used
2015-08-21 23:25:59 13544 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-08-21 23:25:59 13544 [Note] InnoDB: Using Linux native AIO
2015-08-21 23:25:59 13544 [Note] InnoDB: Using CPU crc32 instructions
2015-08-21 23:25:59 13544 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-08-21 23:25:59 13544 [Note] InnoDB: Completed initialization of buffer pool
2015-08-21 23:25:59 13544 [Note] InnoDB: Highest supported file format is Barracuda.
2015-08-21 23:25:59 13544 [Note] InnoDB: Log scan progressed past the checkpoint lsn 581241150
2015-08-21 23:25:59 13544 [Note] InnoDB: Database was not shutdown normally!
2015-08-21 23:25:59 13544 [Note] InnoDB: Starting crash recovery.
2015-08-21 23:25:59 13544 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-08-21 23:25:59 13544 [Note] InnoDB: Restoring possible half-written data pages
2015-08-21 23:25:59 13544 [Note] InnoDB: from the doublewrite buffer...
InnoDB: Doing recovery: scanned up to log sequence number 581282693
2015-08-21 23:25:59 13544 [Note] InnoDB: Starting an apply batch of log records to the database...
InnoDB: Progress in percent: 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99
InnoDB: Apply batch completed
2015-08-21 23:26:00 13544 [Note] InnoDB: 128 rollback segment(s) are active.
2015-08-21 23:26:00 13544 [Note] InnoDB: Waiting for purge to start
2015-08-21 23:26:00 13544 [Note] InnoDB: 5.6.23 started; log sequence number 581282693
2015-08-21 23:26:00 13544 [Note] Server hostname (bind-address): '*'; port: 3306
2015-08-21 23:26:00 13544 [Note] IPv6 is not available.
2015-08-21 23:26:00 13544 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-08-21 23:26:00 13544 [Note] Server socket created on IP: '0.0.0.0'.
2015-08-21 23:26:00 13544 [Note] Event Scheduler: Loaded 0 events
2015-08-21 23:26:00 13544 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
2015-08-22 02:36:21 13544 [Warning] IP address '223.100.49.242' could not be resolved: Temporary failure in name resolution
2015-08-22 02:36:56 13544 [Warning] IP address '223.100.49.242' could not be resolved: Temporary failure in name resolution
2015-08-22 02:37:23 13544 [Warning] IP address '223.100.49.242' could not be resolved: Temporary failure in name resolution
2015-08-22 11:27:54 13544 [Warning] IP address '122.224.6.150' could not be resolved: Name or service not known
150822 20:54:11 mysqld_safe Number of processes running now: 0
150822 20:54:11 mysqld_safe mysqld restarted
2015-08-22 20:54:11 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2015-08-22 20:54:11 15947 [Note] Plugin 'FEDERATED' is disabled.
2015-08-22 20:54:11 15947 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-08-22 20:54:11 15947 [Note] InnoDB: The InnoDB memory heap is disabled
2015-08-22 20:54:11 15947 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-08-22 20:54:11 15947 [Note] InnoDB: Memory barrier is not used
2015-08-22 20:54:11 15947 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-08-22 20:54:11 15947 [Note] InnoDB: Using Linux native AIO
2015-08-22 20:54:11 15947 [Note] InnoDB: Using CPU crc32 instructions
2015-08-22 20:54:11 15947 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-08-22 20:54:11 15947 [Note] InnoDB: Completed initialization of buffer pool
2015-08-22 20:54:11 15947 [Note] InnoDB: Highest supported file format is Barracuda.
2015-08-22 20:54:11 15947 [Note] InnoDB: The log sequence numbers 506046855 and 506046855 in ibdata files do not match the log sequence number 589358444 in the ib_logfiles!
2015-08-22 20:54:11 15947 [Note] InnoDB: Database was not shutdown normally!
2015-08-22 20:54:11 15947 [Note] InnoDB: Starting crash recovery.
2015-08-22 20:54:11 15947 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-08-22 20:54:12 15947 [Note] InnoDB: Restoring possible half-written data pages
2015-08-22 20:54:12 15947 [Note] InnoDB: from the doublewrite buffer...
2015-08-22 20:54:13 15947 [Note] InnoDB: 128 rollback segment(s) are active.
2015-08-22 20:54:13 15947 [Note] InnoDB: Waiting for purge to start
2015-08-22 20:54:13 15947 [Note] InnoDB: 5.6.23 started; log sequence number 589358444
2015-08-22 20:54:13 15947 [Note] Server hostname (bind-address): '*'; port: 3306
2015-08-22 20:54:13 15947 [Note] IPv6 is not available.
2015-08-22 20:54:13 15947 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-08-22 20:54:13 15947 [Note] Server socket created on IP: '0.0.0.0'.
2015-08-22 20:54:13 15947 [Note] Event Scheduler: Loaded 0 events
2015-08-22 20:54:13 15947 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
150822 20:54:13 mysqld_safe Number of processes running now: 0
150822 20:54:13 mysqld_safe mysqld restarted
2015-08-22 20:54:13 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2015-08-22 20:54:13 15983 [Note] Plugin 'FEDERATED' is disabled.
2015-08-22 20:54:13 15983 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-08-22 20:54:13 15983 [Note] InnoDB: The InnoDB memory heap is disabled
2015-08-22 20:54:13 15983 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-08-22 20:54:13 15983 [Note] InnoDB: Memory barrier is not used
2015-08-22 20:54:13 15983 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-08-22 20:54:13 15983 [Note] InnoDB: Using Linux native AIO
2015-08-22 20:54:13 15983 [Note] InnoDB: Using CPU crc32 instructions
2015-08-22 20:54:13 15983 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-08-22 20:54:13 15983 [Note] InnoDB: Completed initialization of buffer pool
2015-08-22 20:54:13 15983 [Note] InnoDB: Highest supported file format is Barracuda.
2015-08-22 20:54:13 15983 [Note] InnoDB: The log sequence numbers 506046855 and 506046855 in ibdata files do not match the log sequence number 589358444 in the ib_logfiles!
2015-08-22 20:54:13 15983 [Note] InnoDB: Database was not shutdown normally!
2015-08-22 20:54:13 15983 [Note] InnoDB: Starting crash recovery.
2015-08-22 20:54:13 15983 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-08-22 20:54:13 15983 [Note] InnoDB: Restoring possible half-written data pages
2015-08-22 20:54:13 15983 [Note] InnoDB: from the doublewrite buffer...
2015-08-22 20:54:14 15983 [Note] InnoDB: 128 rollback segment(s) are active.
2015-08-22 20:54:14 15983 [Note] InnoDB: Waiting for purge to start
2015-08-22 20:54:14 15983 [Note] InnoDB: 5.6.23 started; log sequence number 589358444
2015-08-22 20:54:14 15983 [Note] Server hostname (bind-address): '*'; port: 3306
2015-08-22 20:54:14 15983 [Note] IPv6 is not available.
2015-08-22 20:54:14 15983 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-08-22 20:54:14 15983 [Note] Server socket created on IP: '0.0.0.0'.
2015-08-22 20:54:14 15983 [Note] Event Scheduler: Loaded 0 events
2015-08-22 20:54:14 15983 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
2015-08-22 21:28:15 15983 [Warning] IP address '221.229.162.143' could not be resolved: Name or service not known
150822 23:04:56 mysqld_safe Number of processes running now: 0
150822 23:04:56 mysqld_safe mysqld restarted
2015-08-22 23:04:56 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2015-08-22 23:04:56 19131 [Note] Plugin 'FEDERATED' is disabled.
2015-08-22 23:04:56 19131 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-08-22 23:04:56 19131 [Note] InnoDB: The InnoDB memory heap is disabled
2015-08-22 23:04:56 19131 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-08-22 23:04:56 19131 [Note] InnoDB: Memory barrier is not used
2015-08-22 23:04:56 19131 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-08-22 23:04:56 19131 [Note] InnoDB: Using Linux native AIO
2015-08-22 23:04:56 19131 [Note] InnoDB: Using CPU crc32 instructions
2015-08-22 23:04:56 19131 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-08-22 23:04:57 19131 [Note] InnoDB: Completed initialization of buffer pool
2015-08-22 23:04:57 19131 [Note] InnoDB: Highest supported file format is Barracuda.
2015-08-22 23:04:57 19131 [Note] InnoDB: Log scan progressed past the checkpoint lsn 590358682
2015-08-22 23:04:57 19131 [Note] InnoDB: Database was not shutdown normally!
2015-08-22 23:04:57 19131 [Note] InnoDB: Starting crash recovery.
2015-08-22 23:04:57 19131 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-08-22 23:04:57 19131 [Note] InnoDB: Restoring possible half-written data pages
2015-08-22 23:04:57 19131 [Note] InnoDB: from the doublewrite buffer...
InnoDB: Doing recovery: scanned up to log sequence number 590373690
2015-08-22 23:04:57 19131 [Note] InnoDB: Starting an apply batch of log records to the database...
InnoDB: Progress in percent: 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99
InnoDB: Apply batch completed
2015-08-22 23:04:57 19131 [Note] InnoDB: 128 rollback segment(s) are active.
2015-08-22 23:04:57 19131 [Note] InnoDB: Waiting for purge to start
2015-08-22 23:04:57 19131 [Note] InnoDB: 5.6.23 started; log sequence number 590373690
2015-08-22 23:04:57 19131 [Note] Server hostname (bind-address): '*'; port: 3306
2015-08-22 23:04:57 19131 [Note] IPv6 is not available.
2015-08-22 23:04:57 19131 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-08-22 23:04:57 19131 [Note] Server socket created on IP: '0.0.0.0'.
2015-08-22 23:04:57 19131 [Note] Event Scheduler: Loaded 0 events
2015-08-22 23:04:57 19131 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
2015-08-23 02:42:47 19131 [Warning] IP address '221.229.162.143' could not be resolved: Name or service not known
2015-08-23 10:27:43 19131 [Warning] Hostname 'unassigned.psychz.net' does not resolve to '45.34.1.137'.
2015-08-23 10:27:43 19131 [Note] Hostname 'unassigned.psychz.net' has the following IP addresses:
2015-08-23 10:27:43 19131 [Note] - 199.15.112.8
2015-08-23 20:42:45 19131 [Warning] IP address '60.191.129.138' could not be resolved: Name or service not known
150823 20:54:08 mysqld_safe Number of processes running now: 0
150823 20:54:08 mysqld_safe mysqld restarted
2015-08-23 20:54:08 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2015-08-23 20:54:08 9837 [Note] Plugin 'FEDERATED' is disabled.
2015-08-23 20:54:08 9837 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-08-23 20:54:08 9837 [Note] InnoDB: The InnoDB memory heap is disabled
2015-08-23 20:54:08 9837 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-08-23 20:54:08 9837 [Note] InnoDB: Memory barrier is not used
2015-08-23 20:54:08 9837 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-08-23 20:54:08 9837 [Note] InnoDB: Using Linux native AIO
2015-08-23 20:54:08 9837 [Note] InnoDB: Using CPU crc32 instructions
2015-08-23 20:54:08 9837 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-08-23 20:54:08 9837 [Note] InnoDB: Completed initialization of buffer pool
2015-08-23 20:54:08 9837 [Note] InnoDB: Highest supported file format is Barracuda.
2015-08-23 20:54:08 9837 [Note] InnoDB: The log sequence numbers 506046855 and 506046855 in ibdata files do not match the log sequence number 599201345 in the ib_logfiles!
2015-08-23 20:54:08 9837 [Note] InnoDB: Database was not shutdown normally!
2015-08-23 20:54:08 9837 [Note] InnoDB: Starting crash recovery.
2015-08-23 20:54:08 9837 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-08-23 20:54:08 9837 [Note] InnoDB: Restoring possible half-written data pages
2015-08-23 20:54:08 9837 [Note] InnoDB: from the doublewrite buffer...
150823 20:54:08 mysqld_safe mysqld from pid file /var/lib/mysql/{hostname}.pid ended
150823 20:57:33 mysqld_safe Starting mysqld daemon with databases from /var/lib/mysql
2015-08-23 20:57:34 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2015-08-23 20:57:34 10285 [Note] Plugin 'FEDERATED' is disabled.
2015-08-23 20:57:34 10285 [Note] InnoDB: Using atomics to ref count buffer pool pages
2015-08-23 20:57:34 10285 [Note] InnoDB: The InnoDB memory heap is disabled
2015-08-23 20:57:34 10285 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
2015-08-23 20:57:34 10285 [Note] InnoDB: Memory barrier is not used
2015-08-23 20:57:34 10285 [Note] InnoDB: Compressed tables use zlib 1.2.3
2015-08-23 20:57:34 10285 [Note] InnoDB: Using Linux native AIO
2015-08-23 20:57:34 10285 [Note] InnoDB: Using CPU crc32 instructions
2015-08-23 20:57:34 10285 [Note] InnoDB: Initializing buffer pool, size = 128.0M
2015-08-23 20:57:34 10285 [Note] InnoDB: Completed initialization of buffer pool
2015-08-23 20:57:34 10285 [Note] InnoDB: Highest supported file format is Barracuda.
2015-08-23 20:57:34 10285 [Note] InnoDB: The log sequence numbers 506046855 and 506046855 in ibdata files do not match the log sequence number 599201345 in the ib_logfiles!
2015-08-23 20:57:34 10285 [Note] InnoDB: Database was not shutdown normally!
2015-08-23 20:57:34 10285 [Note] InnoDB: Starting crash recovery.
2015-08-23 20:57:34 10285 [Note] InnoDB: Reading tablespace information from the .ibd files...
2015-08-23 20:57:34 10285 [Note] InnoDB: Restoring possible half-written data pages
2015-08-23 20:57:34 10285 [Note] InnoDB: from the doublewrite buffer...
2015-08-23 20:57:34 10285 [Note] InnoDB: 128 rollback segment(s) are active.
2015-08-23 20:57:34 10285 [Note] InnoDB: Waiting for purge to start
2015-08-23 20:57:34 10285 [Note] InnoDB: 5.6.23 started; log sequence number 599201345
2015-08-23 20:57:34 10285 [Note] Server hostname (bind-address): '*'; port: 3306
2015-08-23 20:57:34 10285 [Note] IPv6 is not available.
2015-08-23 20:57:34 10285 [Note] - '0.0.0.0' resolves to '0.0.0.0';
2015-08-23 20:57:34 10285 [Note] Server socket created on IP: '0.0.0.0'.
2015-08-23 20:57:34 10285 [Note] Event Scheduler: Loaded 0 events
2015-08-23 20:57:34 10285 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.6.23' socket: '/var/lib/mysql/mysql.sock' port: 3306 MySQL Community Server (GPL)
MySQL 5.6 is not supposed to use 5.5 unmodified data files - the format changes in every version and, sometimes, it changes even for patch versions.
After an upgrade you should run mysql_upgrade. Then, you can use your database normally.
First item of action would be to disconnect from your website immediately to prevent further corruption. One way to do this is to just alter the credentials of your application.
You'll need to perform a repair of the data to fix the inconsistencies in the binary logs.
Please refer to this article from MySql, which provides steps to repair. The tool mysqlcheck should be available in the command line.