How can I make a predefined Python function work with Z3py? - function

As a beginner in Z3, I am wondering if there is a way to make Z3Py work with a predefined Python function. Following is a small example which explains my question.
from z3 import *
def f(x):
if x > 0:
print " > 0"
return 1
else:
print " <= 0"
return 0
a=Int('a')
s=Solver()
s.insert(f(a) == 0)
t = s.check()
print t
print a
m = s.model()
print m
f(x) is a function defined in python. When x <= 0, f(x) returns 0. I add a constraint s.insert(f(a) == 0) and hope that Z3 can find a appropriate value for variable "a" (e.g. -3). But these codes are not working correctly. How should I change it?
(Please note that I need f(x) defined outside Z3, and then is called by Z3. )
What I am trying to do is calling a predefined function provided by a graph library without translating it to Z3. I am using the NetworkX library, and some codes are given as following:
import networkx as nx
G1=nx.Graph()
G1.add_edge(0,1)
G2=nx.Graph()
G2.add_edge(0,1)
G2.add_edge(1,2)
print(nx.is_isomorphic(G1, G2))
#False
I need Z3 to help me find a vertex in G2 such that after removing this vertex, G2 is isomorphic to G1. e.g.
G2.remove_node(0)
print(nx.is_isomorphic(G1, G2))
#True

I think this will be tough if f is a general function (e.g., what if it's recursive?), although if you assume it has some structure (e.g., if then else), you might be able to write a simple translator. The issue is that Z3's functions are mathematical in nature and not directly equivalent to Python functions (see http://en.wikipedia.org/wiki/Uninterpreted_function ). If possible for your purpose, I would propose to go the opposite direction: define your function f in terms of Z3 constructs, then evaluate it within your program (e.g., using this method: Z3/Python getting python values from model ). If that won't work for you, please include some additional details on how you need to use the function. Here's a minimal example (rise4fun link: http://rise4fun.com/Z3Py/pslw ):
def f(x):
return If(x > 0, 1, 0)
a=Int('a')
s=Solver()
P = (f(a) == 0)
s.add(P)
t = s.check()
print t
print a
m = s.model()
print m
res = simplify(f(m[a])) # evaluate f at the assignment to a found by Z3
print "is_int_value(res):", is_int_value(res)
print res.as_long() == 0 # Python 0
print f(1)
print simplify(f(1)) # Z3 value of 1, need to convert as above

Related

Julia waits for function to finish before printing message in a loop

I have a function in Julia that requires to do things in a loop. A parameter is passed to the loop, and the bigger this parameter, the slower the function gets. I would like to have a message to know in which iteration it is, but it seems that Julia waits for the whole function to be finished before printing anything. This is Julia 1.4. That behaviour was not on Julia 1.3.
A example would be like this
function f(x)
rr=0.000:0.0001:x
aux=0
for r in rr
print(r, " ")
aux+=veryslowfunction(r)
end
return aux
end
As it is, f, when called, does not print anything until it has finished.
You need to add after the print command:
flush(stdout)
Explanation
The standard output of a process is usually buffered. The particular buffer size and behavior will depend on your system setting and perhaps the terminal type.
By flushing the buffer you make sure that the contents is actually sent to the terminal.
Alternatively, you can also use a library like ProgressLogging.jl (needs TerminalLoggers.jl to see actual output), or ProgressMeter.jl, which will automatically update a nicely formatted status bar during each step of the loop.
For example, with ProgressMeter, a call to
function f(x)
rr=0.000:0.0001:x
aux=0
#showprogress for r in rr
aux += veryslowfunction(r)
end
return aux
end
will show something like (in the end):
Progress: 100%|██████████████████████████████████████████████████████████████| Time: 0:00:10
Again I can't reproduce the behaviour in my terminal (it always prints), but I wanted to add that for these types of situations the #show macro is quite neat:
julia> function f(x)
rr=0.000:0.0001:x
aux=0
for r in rr
#show r
aux+=veryslowfunction(r)
end
return aux
end
f (generic function with 1 method)
julia> f(1)
r = 0.0
r = 0.0001
r = 0.0002
...
It uses println under the hood:
julia> using MacroTools
julia> a = 5
5
julia> prettify(#expand(#show a))
quote
Base.println("a = ", Base.repr($(Expr(:(=), :ibex, :a))))
ibex
end

How does one insert fortran code from an external file into a separate code?

I'd like to have my code take code written in another document, read it, and then use it as though it was written in the code. Say we have the following:
MODULE samplemod
CONTAINS
FUNCTION sillysum(boudary,function) RESULT(counter)
IMPLICIT NONE
REAL(KIND=8) :: boundary, counter
REAL(KIND=8), DIMENSION(:) :: function
INTEGER :: m
counter = 0.d0
DO m = 1, my_mesh%me
counter = function(m) + externalfunction
END DO
END FUNCTION sillysum
END MODULE samplemod
PROGRAM sampleprogram
USE samplemod
REAL(KIND=8), DIMENSION(:) :: function1
ALLOCATE(function1(100))
DO m=1, 100
function1(i) = i
END DO
WRITE(*,*) sillysum(100,function1)
END PROGRAM sampleprogram
Where in some external file (say 'externfunct.txt') one has written m**2. How can the Fortran code read the external function m**2, SIN(m), or even 0 and have that replace externalfunction. Here's a simpler example:
REAL(KIND=8) :: x = 2
CHARACTER(LEN=*) :: strng = "external"
WRITE(*,*) "Hello world, 2 + ", strng, " = ", 2 + external
Where in a txt file I have written I have written SIN(x).
I think there are two different approaches for this (* in fact, there seems a "third" approach also, see EDIT); one is to use a shared library, and the other is to use a parser for math expressions. The first approach is described in a Rossetastone page (Call a function in a shared library) and an SO page (Fortran dynamic libraries, load at runtime?), for example. For the second approach, you can find 3rd-party libraries by searching with "math parser" or "Fortran math parser" etc. Here, I have tried this one because it seems pretty simple (only one module and no installation). If we write a simple test program like this
program test
use interpreter, only: init, evaluate, dp => realkind
implicit none
integer, parameter :: mxvars = 10 !! consider 10 variables at most here
character(10) :: symbols( mxvars )
real(dp) :: values( mxvars ), answer
character(1000) :: funcstr !! a user-defined math expression
character(5) :: stat
!> Define variable names.
symbols( 1 ) = "x"
symbols( 2 ) = "a"
symbols( 3 ) = "b"
symbols( 4 ) = "c"
symbols( 5 ) = "foo"
!> Get a math expression.
print *, "Please input a math expression:"
read(*, "(a)") funcstr !! e.g., a * x + b
!> Init the evaluator.
call init( funcstr, symbols, stat )
if ( stat /= "ok" ) stop "stat /= ok"
!> Set values for the variables.
values( : ) = 0
values( 1 ) = 2.0_dp ! x
values( 2 ) = 10.0_dp ! a
values( 3 ) = 7.0_dp ! b
!> Evaluate.
answer = evaluate( values )
print *, "function value = ", answer
end program
and compile it as (*1)
$ gfortran -ffree-line-length-none interpreter.f90 mytest.f90
we can test various expressions as follows:
$ ./a.out
Please input a math expression:
a * x + b
function value = 27.000000000000000
$ ./a.out
Please input a math expression:
sin( a * x ) + cos( b ) + foo
function value = 1.6668475050709324
The usage of other libraries also seems very similar. Because the performance of each library may be rather different, it may be useful to try several different libraries for comparison.
(*1) The module has some lines with sind, cosd, and tand, but they are not supported by gfortran. So, to compile, I have commented them out and replaced them by stop, i.e.,
stop "sind not supported..."
! pdata(st) = sind(pdata(st))
(I guess sind(x) means sin( x * pi / 180 ), so it may be OK to define it as such.)
[EDIT]
A "third" approach may be to call the built-in eval() function in interpreted languages like Python or Julia via system(), e.g., this SO page. Although this also has a lot of weak points (and it is probably much easier to use such languages directly), calling eval() from Fortran might be useful for some specific purposes.

Program Works in Python 2.7, but not Python 3.3 (Syntax is compatible for both)

So I have the function integral(function, n=1000, start=0, stop=100) defined in nums.py:
def integral(function, n=1000, start=0, stop=100):
"""Returns integral of function from start to stop with 'n' rectangles"""
increment, num, x = float(stop - start) / n, 0, start
while x <= stop:
num += eval(function)
if x >= stop: break
x += increment
return increment * num
However, my teacher (for my Programming class) wants us to create a separate program that gets the input using input() and then returns it. So, I have:
def main():
from nums import integral # imports the function that I made in my own 'nums' module
f, n, a, b = get_input()
result = integral(f, n, a, b)
msg = "\nIntegration of " + f + " is: " + str(result)
print(msg)
def get_input():
f = str(input("Function (in quotes, eg: 'x^2'; use 'x' as the variable): ")).replace('^', '**')
# The above makes it Python-evaluable and also gets the input in one line
n = int(input("Numbers of Rectangles (enter as an integer, eg: 1000): "))
a = int(input("Start-Point (enter as an integer, eg: 0): "))
b = int(input("End-Point (enter as an integer, eg: 100): "))
return f, n, a, b
main()
When run in Python 2.7, it works fine:
>>>
Function (in quotes, eg: 'x^2'; use 'x' as the variable): 'x**2'
Numbers of Rectangles (enter as an integer, eg: 1000): 1000
Start-Point (enter as an integer, eg: 0): 0
End-Point (enter as an integer, eg: 100): 100
Integration of x**2 is: 333833.5
However, in Python 3.3 (which my teacher insists we use), it raises an error in my integral function, with the same exact input:
Traceback (most recent call last):
File "D:\my_stuff\Google Drive\documents\SCHOOL\Programming\Python\Programming Class\integration.py", line 20, in <module>
main()
File "D:\my_stuff\Google Drive\documents\SCHOOL\Programming\Python\Programming Class\integration.py", line 8, in main
result = integral(f, n, a, b)
File "D:\my_stuff\Google Drive\Modules\nums.py", line 142, in integral
num += eval(function)
TypeError: unsupported operand type(s) for +=: 'int' and 'str'
In addition, integral by itself (in Python 3.3) works fine:
>>> from nums import integral
>>> integral('x**2')
333833.4999999991
Because of that, I believe the fault is in my program for my class... Any and all help is appreciated. Thanks :)
The issue you're running into is that input works differently in Python 2 and Python 3. In Python 3, the input function works like the raw_input does in Python 2. Python 2's input function is equivalent to eval(input()) in Python 3.
You're getting into trouble because of the quoteation marks you're typing with the formula. When you type 'x**2' (with the quotes) as your formula when running on Python 2, the text gets evaled in the input function and you get a string with no quotation marks as the result. This works.
When you give the same string to Python 3's input function, it doesn't do an eval, so the quotation marks remain. When you later eval the formula as part of your integral calculation, you get the string x**2 (without any quotation marks) as the result, not the value of x squared. This results in an exception when you try the string to 0.
To fix this, I suggest either using just one version of Python, or putting the following code at the top of your file to get a Python 3 style input in both versions:
# ensure we have Python 3 semantics from input, even in Python 2
try:
input = raw_input
except NameError:
pass
Then just type in your formula without quotation marks and it should work correctly.

Passing a function as a parameter in a MATLAB function [duplicate]

This question already has answers here:
Closed 10 years ago.
Possible Duplicate:
Passing a function as argument to another function
Below is a simple code for the bisection method. I would like to know how to be able to pass in any function I choose as a parameter instead of hard coding functions.
% This is an implementation of the bisection method
% for a solution to f(x) = 0 over an interval [a,b] where f(a) and f(b)
% Input: endpoints (a,b),Tolerance(TOL), Max # of iterations (No).
% Output: Value p or error message.
function bjsect(a,b,TOL,No)
% Step 0
if f(a)*f(b)>0
disp('Function fails condition of f(a),f(b) w/opposite sign'\n);
return
end
% Step 1
i = 1;
FA = f(a);
% Step 2
while i <= No
% Step 3
p = a +(b - a)/2;
FP = f(p);
% Step 4
if FP == 0 || (b - a)/2 < TOL
disp(p);
return
end
% Step 5
i = i + 1;
% Step 6
if FA*FP > 0
a = p;
else
b = p;
end
% Step 7
if i > No
disp('Method failed after No iterations\n');
return
end
end
end
% Hard coded test function
function y = f(x)
y = x - 2*sin(x);
end
I know this is an important concept so any help is greatly appreciated.
The simplest method is using anonymous functions. In your example, you would define your anonymous function outside bjsect using:
MyAnonFunc = #(x) (x - 2 * sin(x));
You can now pass MyAnonFunc into bjsect as an argument. It has the object type of function handle, which can be validated using isa. Inside bjsect simply use MyAnonFunc as if it is a function, ie: MyAnonFunc(SomeInputValue).
Note, you can of course wrap any function you've written in an anonymous function, ie:
MyAnonFunc2 = #(x) (SomeOtherCustomFunction(x, OtherInputArgs));
is perfectly valid.
EDIT: Oops, just realized this is almost certainly a duplicate of another question - thanks H. Muster, I'll flag it.

Wanted: Matlab example of an anonymous function returning more than 1 output

I use anonymous functions for simple data value transforms. The anonymous functions are defined with the following syntax
sqr = #(x) x.^2;
I would like to have a simple anonymous function that returns more than one output that can be used as follows . . .
[b,a] = myAnonymousFunc(x);
The Matlab documentation suggests that this is possible, but it does not give an example of the syntax needed to define such a function.
http://www.mathworks.co.uk/help/techdoc/matlab_prog/f4-70115.html#f4-71162
What is the syntax to define such a function [in a single line, like the code example at the top of my post]?
Does this do what you need?
>> f = #(x)deal(x.^2,x.^3);
>> [a,b]=f(3)
a =
9
b =
27
With this example, you need to ensure that you only call f with exactly two output arguments, otherwise it will error.
EDIT
At least with recent versions of MATLAB, you can return only some of the output arguments using the ~ syntax:
>> [a,~]=f(3)
a =
9
>> [~,b]=f(3)
b =
27
If you'd rather not skip outputs using tilde ~ nor output a cell array, you'd only need an auxiliary anonymous function:
deal2 = #(varargin) deal(varargin{1:nargout});
myAnonymousFunc = #(x) deal2(x.^2, x.^3);
then you can obtain just the first output argument or both first and second one:
x = 2;
[b,a] = myAnonymousFunc(x)
b = myAnonymousFunc(x)
results:
b =
4
a =
8
b =
4
You can get multiple outputs from an anonymous function if the function being called returns more than a single output. See this blog post on the MathWorks website for examples of this in action.
There are two ways to get multiple outputs from an anonymous function:
Call a function which returns multiple outputs
From the blog post linked to, they use the eig function like so
fdoubleEig = #(x) eig(2*x)
[e, v] = fdoubleEig(magic(3))
Alternatively you can construct an anonymous function which returns multiple outputs using the deal function.
Here is one I made up:
>>> f = #(x, y, z) deal(2*x, 3*y, 4*z)
>>> [a, b, c] = f(1, 2, 3)
a =
2
b =
6
c =
12
Edit: As noted by Sam Roberts, and in the blog post I link to, you must use the correct number of output arguments when using deal, otherwise an error is thrown. One way around this is to return a cell of results. For example
>>> f = #(x, y, z) {2*x, 3*y, 4*z}
>>> t = f(1, 2, 3)
>>> [a, b, c] = t{:}
a =
2
b =
6
c =
12