Compiling hybrid CUDA/MPI and CUDA/UPC - cuda

How can I compile MPI/CUDA and UPC/CUDA hybrid code? Do I have to separately compile them or can I use language constructs interchangeably and compile as a single source file? Could someone with previous experience in this area help? Thanks in advance

MPI/CUDA - As JackOLantern has pointed out, can write MPI and CUDA code in separate files, compile them and link them.
For UPC, if it is Berkeley UPC, same procedure can be done but have to do a small change at the initial configuration. When defining the compiler parameters, have to provide NVCC as both C and C++ compilers.

Related

calling cuda c kernel from fortran 90

I am planning to call a typical matrix multiply CUDA C kernel from a fortran program. I am referring the following link http://www-irma.u-strasbg.fr/irmawiki/index.php/Call_CUDA_from_Fortran . I would be glad if any resources is available on this. I intend to avoid PGI Cuda Fortran as I am not possessing the compiler. In the link above I cannot make out what should be the CUDA.F90 file. I assume the last code given in the link is that of main.F90. Kindly help.
Perhaps you need to re-read the very first line of that page you linked to. Those instructions are relying on a set of external ISO C bindings for the CUDA API. That is where the CUDA.F90 file you are asking about comes from. You will need to download and build the FortCUDA bindings to use the instructions on that wiki page.
Edited to add that given your last question was about compilation in Nsight Visual Studio Edition, it would seem that you are running on a Windows platform. You should know that you can't use gcc to build CUDA applications on Windows platforms. The supplied CUDA libraries will only work with either the Microsoft toolchain or (possibly) Intel's compilers in certain cases.

how to extract ptx from cuda exe and some related cuda compiler questions

1)I want to extract ptx code from a CUDA exe and use that kernel code in another program .
Is there a way to identify the kernel ptx code from an exe. I know they are arbitrarily laid out in an exe file data section.
I learnt that in MAC executables the ptx kernels start with .version and ends with a null string. Is there something like that for win exe(PE) files. I guess i need to parse the exe file , gather ptx statements one at a time and group them together as kernels. But I dont know how i would go about it. some help would get me started. I also find a .nvFatBi section in Cuda exe. What is that supposed to be?
2)I also learnt that there are global constructors which register the cubin with the cuda runtime. I dont understand this part completely. Does the function cudaRegisterFatBinary come into play here. If so how can I use this ptx to supply the pointer to the cudaRegisterFatBinary ? I understand i have to compile the ptx to cubin file . is it possible programatically? In short i want to emulate the nvcc itself in some sense.
Try: cuobjdump --dump-ptx [executable-name]

cuda with mingw - updated

We have been developing our code in linux, but would like to compile a windows executable. The old non-gpu version compiles just fine with mingw in windows, so I was hoping I'd be able to do the same with the CUDA version.
The strategy is to compile kernel code with nvcc in visual studio, and the rest with gcc in mingw.
So far, we easily compiled the .cu file (with the kernel and kernel launches) in visual studio. However, we still can't compile the c code in mingw. The c code contains cuda api calls such as cudaMalloc and cuda types such as cudaEvent_t, so we must include cuda.h and cuda_runtime.h. However, gcc gives warnings and errors for these headers, for example:
../include/host_defines.h:57:0: warning: "__cdecl" redefined
and
../include/vector_functions.h:127:14: error: 'short_4' has no member named 'x'
Any ideas on how we can include these headers and compile the c portion of the code?
If you are really desperate there might be a way. The nvcc is really just a frontend for a bunch of compilers. It invokes g++ a lot to strip comments, separate device and host code, handle name mangling, link stuff back together, etc. (use --verbose) to get the details.
My idea is as follows: You should be able to compile the host code with mingw while compiling the device code to a fatbin on a linux machine (as I guess the device binary is host-machine independent). Afterwards link both parts of the code back together with mingw or use the driver API to load the fatbin dynamically. Disclaimer: Did not test!
As far as I know, it is impossible to use CUDA without MSVC. So, you need MSVC to make nvcc work, and you can compile CPU code with mingw and link everything together.
According to http://forums.nvidia.com/index.php?showtopic=30743
"There are no current plans to support mingw."
You might want to take a look at how the cycles renderer handles this, look at https://developer.blender.org/diffusion/B/browse/master/extern/cuew/ and
https://developer.blender.org/diffusion/B/browse/master/intern/cycles/device/device_cuda.cpp
I know it's not an automagic trick but it might help you get started.

how to use my existing .cpp code with cuda

I hv code in c++ and wanted to use it along with cuda.Can anyone please help me? Should I provide my code?? Actually I tried doing so but I need some starting code to proceed for my code.I know how to do simple square program (using cuda and c++)for windows(visual studio) .Is it sufficient to do the things for my program?
The following are both good places to start. CUDA by Example is a good tutorial that gets you up and running pretty fast. Programming Massively Parallel Processors includes more background, e.g. chapters on the history of GPU architecture, and generally more depth.
CUDA by Example: An Introduction to General-Purpose GPU Programming
Programming Massively Parallel Processors: A Hands-on Approach
These both talk about CUDA 3.x so you'll want to look at the new features in CUDA 4.x at some point.
Thrust is definitely worth a look if your problem maps onto it well (see comment above). It's an STL-like library of containers, iterators and algorithms that implements data-parallel algorithms on top of CUDA.
Here are two tutorials on getting started with CUDA and Visual C++ 2010:
http://www.ademiller.com/blogs/tech/2011/03/using-cuda-and-thrust-with-visual-studio-2010/
http://blog.cuvilib.com/2011/02/24/how-to-run-cuda-in-visual-studio-2010/
There's also a post on the NVIDIA forum:
http://forums.nvidia.com/index.php?showtopic=184539
Asking very general how do I get started on ... on Stack Overflow generally isn't the best approach. Typically the best reply you'll get is "go read a book or the manual". It's much better to ask specific questions here. Please don't create duplicate questions, it isn't helpful.
It's a non-trivial task to convert a program from straight C(++) to CUDA. As far as I know, it is possible to use C++ like stuff within CUDA (esp. with the announced CUDA 4.0), but I think it's easier to start with only C stuff (i.e. structs, pointers, elementary data types).
Start by reading the CUDA programming guide and by examining the examples coming with the CUDA SDK or available here. I personally found the vector addition sample quite enlightening. It can be found over here.
I can not tell you how to write your globals and shareds for your specific program, but after reading the introductory material, you will have at least a vague idea of how to do.
The problem is that it is (as far as I know) not possible to tell a generic way of transforming pure C(++) into code suitable for CUDA. But here are some corner stones for you:
Central idea for CUDA: Loops can be transformed into different threads executed multiple times in parallel on the GPU.
Therefore, the single iterations optimally are independent of other iterations.
For optimal execution, the single execution branches of the threads should be (almost) the same, i.e. the single threads sould do almost the same.
You can have multiple .cpp and .cu files in your project. Unless you want your .cu files to contain only device code, it should be fairly easy.
For your .cu files you specify a header file, containing host functions in it. Then, include that header file in other .cu or .cpp files. The linker will do the rest. It is nothing different than having multiple plain C++ .cpp files in your project.
I assume you already have CUDA rule files for your Visual Studio.

how to use my existing .cpp code to write cuda code [duplicate]

I hv code in c++ and wanted to use it along with cuda.Can anyone please help me? Should I provide my code?? Actually I tried doing so but I need some starting code to proceed for my code.I know how to do simple square program (using cuda and c++)for windows(visual studio) .Is it sufficient to do the things for my program?
The following are both good places to start. CUDA by Example is a good tutorial that gets you up and running pretty fast. Programming Massively Parallel Processors includes more background, e.g. chapters on the history of GPU architecture, and generally more depth.
CUDA by Example: An Introduction to General-Purpose GPU Programming
Programming Massively Parallel Processors: A Hands-on Approach
These both talk about CUDA 3.x so you'll want to look at the new features in CUDA 4.x at some point.
Thrust is definitely worth a look if your problem maps onto it well (see comment above). It's an STL-like library of containers, iterators and algorithms that implements data-parallel algorithms on top of CUDA.
Here are two tutorials on getting started with CUDA and Visual C++ 2010:
http://www.ademiller.com/blogs/tech/2011/03/using-cuda-and-thrust-with-visual-studio-2010/
http://blog.cuvilib.com/2011/02/24/how-to-run-cuda-in-visual-studio-2010/
There's also a post on the NVIDIA forum:
http://forums.nvidia.com/index.php?showtopic=184539
Asking very general how do I get started on ... on Stack Overflow generally isn't the best approach. Typically the best reply you'll get is "go read a book or the manual". It's much better to ask specific questions here. Please don't create duplicate questions, it isn't helpful.
It's a non-trivial task to convert a program from straight C(++) to CUDA. As far as I know, it is possible to use C++ like stuff within CUDA (esp. with the announced CUDA 4.0), but I think it's easier to start with only C stuff (i.e. structs, pointers, elementary data types).
Start by reading the CUDA programming guide and by examining the examples coming with the CUDA SDK or available here. I personally found the vector addition sample quite enlightening. It can be found over here.
I can not tell you how to write your globals and shareds for your specific program, but after reading the introductory material, you will have at least a vague idea of how to do.
The problem is that it is (as far as I know) not possible to tell a generic way of transforming pure C(++) into code suitable for CUDA. But here are some corner stones for you:
Central idea for CUDA: Loops can be transformed into different threads executed multiple times in parallel on the GPU.
Therefore, the single iterations optimally are independent of other iterations.
For optimal execution, the single execution branches of the threads should be (almost) the same, i.e. the single threads sould do almost the same.
You can have multiple .cpp and .cu files in your project. Unless you want your .cu files to contain only device code, it should be fairly easy.
For your .cu files you specify a header file, containing host functions in it. Then, include that header file in other .cu or .cpp files. The linker will do the rest. It is nothing different than having multiple plain C++ .cpp files in your project.
I assume you already have CUDA rule files for your Visual Studio.