Clustering, Sharding or simple Partition / Replication - mysql

We have created a Facebook application and it got a lot of virality. The problem is that our database started getting REALLY FULL (some tables have more than 25 million rows now). It got to the point that the app just stopped working because there was a queue of thousands and thousands of writes to be made.
I need to implement a solution for scaling this app QUICKLY but I'm not sure if I should pursue Sharding or Clustering since I'm not sure what are the pro's and con's of each of them and I was thinking of doing a Partition / Replication approach but I think that doesn't help if the load is on the writes?

25 million rows is a completely reasonable size for a well-constructed relational database. Something you should bear in mind, however, is that the more indexes you have (and the more comprehensive they are), the slower your writes will be. Indexes are designed to improve query performance at the expense of write speed. Be sure that you're not over-indexed.
What sort of hardware is powering this database? Do you have enough RAM? It's far easier to change these attributes than it is to try to implement complex RDBMS load balancing techniques, especially if you're under a time crunch.

Clustering/Sharding/Partitioning comes when single node has reached to the point where its hardware cannot bear the load. But your hardware has still room to expand.
This is the first lesson I learnt when I started being hit by such issues

Well, to understand that, you need to understand how MySQL handles clustering. There are 2 main ways to do it. You can either do Master-Master replication, or NDB (Network Database) clustering.
Master-Master replication won't help with write loads, since both masters need to replay every single write issued (so you're not gaining anything).
NDB clustering will work very well for you if and only if you are doing mostly primary key lookups (since only with PK lookups can NDB operate more efficient than a regular master-master setup). All data is automatically partitioned among many servers. Like I said, I would only consider this if the vast majority of your queries are nothing more than PK lookups.
So that leaves two more options. Sharding and moving away from MySQL.
Sharding is a good option for handling a situation like this. However, to take full advantage of sharding, the application needs to be fully aware of it. So you would need to go back and rewrite all the database accessing code to pick the right server to talk to for each query. And depending on how your system is currently setup, it may not be possible to effectively shard...
But another option which I think may suit your needs best is switching away from MySQL. Since you're going to need to rewrite your DB access code anyway, it shouldn't be too hard to switch to a NoSQL database (again, depending on your current setup). There are tons of NoSQL servers out there, but I like MongoDB. It should be able to withstand your write load without worry. Just beware that you really need a 64 bit server to use it properly (with your data volume).

Replication is for data backup not for performance so its out of question.
Well, 8GB RAM is still not that much you can have many hundred GB RAM with quite big hard disk space and MySQL would still work for you.
Clustering/Sharding/Partitioning comes when single node has reached to the point where its hardware cannot bear the load. But your hardware has still room to expand.
If you don't want to upgrade your hardware then you need to give more information about database design and if there are lot of joins or not so that above named options can be considered deeply.

Related

Is mongoDB or Cassandra better than MySQL for large datasets?

In our (currently MySQL) database there are over 120 million records, and we make frequent use of complex JOIN queries and application-level logic in PHP that touch the database. We're a marketing company that does data mining as our primary focus, so we have many large reports that need to be run on a daily, weekly, or monthly basis.
Concurrently, customer service operates on a replicated slave of the same database.
We would love to be able to make these reports happen in real time on the web instead of having to manually generate spreadsheets for them. However, many of our reports take a significant amount of time to pull data for (in some cases, over an hour).
We do not operate in the cloud, choosing instead to operate using two physical servers in our server room.
Given all this, what is our best option for a database?
I think you're going the wrong way about the problem.
Thinking if you drop in NoSQL that you'll get better performance is not really true. At the lowest level, you're writing and retrieving a fair chunk of data. That implies your bottleneck is (most likely) HDD I/O (which is the common bottleneck).
Sticking to the hardware you have momentarily and using a monolithic data storage isn't scalable and as you noticed - has implications when wanting to do something in real-time.
What are your options? You need to scale your server and software setup (which is what you'd have to do with any NoSQL anyway, stick in faster hard drives at some point).
You also might want to look into alternative storage engines (other than MyISAM and InnoDB - for example, one of better engines that seemingly turn random I/O to sequential I/O is TokuDB).
Implementing faster HDD subsystem would also aid to your needs (FusionIO if you have the resources to get it).
Without more information on your end (what the server setup is, what MySQL version you're using and what storage engines + data sizes you're operating with), it's all speculation.
Cassandra still needs Hadoop for MapReduce, and MongoDB has limited concurrency with regard to MapReduce...
... so ...
... 120 mio records is not that much, and MySQL should easily be able to handle that. My guess is an IO bottleneck, or you're doing lots of random reads instead of sequential reads. I'd rather hire a MySQL techie for a month or so to tune your schema and queries, instead of investing into a new solution.
If you provide more information about your cluster, we might be able to help you better. "NoSQL" by itself is not the solution to your problem.
As much as I'm not a fan of MySQL once your data gets large, I have to say that you're nowhere near needing to move to a NoSQL solution. 120M rows is not a big deal: the database I'm currently working with has ~600M in one table alone and we query it efficiently. Managing that much data from an ops perspective is the problem; querying it isn't.
It's all about proper indexes and the correct use of them when joining, and secondarily memory settings. Find your slow queries (mysql slow query log FTW!), and learn to use the explain keyword to understand whey they are slow. Then tweak your indexes so your queries are efficient. Further, make sure you understand MySQL's memory settings. There are great pages in the docs explaining how they work, and they aren't that hard to understand.
If you've done both of those things and you're still having problems, make sure disk I/O isn't an issue. Then you should look in to another solution for querying your data if it is.
NoSQL solutions like Cassandra have a lot of benefits. Cassandra is fantastic at writing data. Scaling your writes is very easy--just add more nodes! But the tradeoff is that it's harder to get the data back out. From a cost perspective, if you have expertise in MySQl, it's probably better to leverage that and scale your current solution until it hits a limit before completely switching your underlying architecture.

Maximum capabilities of MySQL

How do I know when a project is just to big for MySQL and I should use something with a better reputation for scalability?
Is there a max database size for MySQL before degradation of performance occurs? What factors contribute to MySQL not being a viable option compared to a commercial DBMS like Oracle or SQL Server?
Google uses MySQL. Is your project bigger than Google?
Smart-alec comments aside, MySQL is a professional level database application. If your application puts a strain on MySQL, I bet it'll do the same to just about any other database.
If you are looking for a couple of examples:
Facebook moved to Cassandra only after it was storing over 7 Terabytes of inbox data. (Source: Lakshman, Malik: Cassandra - A Decentralized Structured Storage System.) (... Even though they were having quite a few issues at that stage.)
Wikipedia also handles hundreds of Gigabytes of text data in MySQL.
I work for a very large Internet company. MySQL can scale very, very large with very good performance, with a couple of caveats.
One problem you might run into is that an index greater than 4 gigabytes can't go into memory. I spent a lot of time once trying to improve the MySQL's full-text performance by fiddling with some index parameters, but you can't get around the fundamental problem that if your query hits disk for an index, it gets slow.
You might find some helper applications that can help solve your problem. For the full-text problem, there is Sphinx: http://www.sphinxsearch.com/
Jeremy Zawodny, who now works at Craig's List, has a blog on which he occasionally discusses the performance of large databases: http://blog.zawodny.com/
In summary, your project probably isn't too big for MySQL. It may be too big for some of the ways that you've used MySQL before, and you may need to adapt them.
Mostly it is table size.
I am assuming here that you will use the Oracle innoDB plugin for mysql as your engine. If you do not, that probably means you're using a commercial engine such as infiniDB, InfoBright for Tokutek, in which case your questions should be sent to them.
InnoDB gets a bit nasty with very large tables. You are advised to partition your tables if at all possible with very large instances. Essentially, if your (frequently used) indexes don't all fit into ram, inserts will be very slow as they need to touch a lot of pages not in ram. This cannot be worked around.
You can use the MySQL 5.1 partitioning feature if it does what you want, or partition your tables at the application level if it does not. If you can get your tables' indexes to fit in ram, and only load one table at a time, then you're on a winner.
You can use the plugin's compression to make your ram go a bit further (as the pages are compressed in ram as well as on disc) but it cannot beat the fundamental limtation.
If your table's indexes don't all (or at least MOSTLY - if you have a few indexes which are NULL in 99.99% of cases you might get away without those ones) fit in ram, insert speed will suck.
Database size is not a major issue, provided your tables individually fit in ram while you're doing bulk loading (and of course, you only load one at once).
These limitations really happen with most row-based databases. If you need more, consider a column database.
Infobright and Infinidb both use a mysql-based core and are column based engines which can handle very large tables.
Tokutek is quite interesting too - you may want to contact them for an evaluation.
When you evaluate the engine's suitability, be sure to load it with very large data on production-grade hardware. There's no point in testing it with a (e.g.) 10G database, that won't prove anything.
MySQL is a commercial DBMS, you just have the option to get the support/monitoring that is offered by Oracle or Microsoft. Or you can use community support or community provided monitoring software.
Things you should look at are not only size at operations. Critical are also:
Scenaros for backup and restore?
Maintenance. Example: SQL Server Enterprise can rebuild an index WHILE THE OLD ONE IS AVAILABLE - transparently. This means no downtime for an index rebuild.
Availability (basically you do not want to have to restoer a 5000gb database if a server dies) - mirroring preferred, replication "sucks" (technically).
Whatever you go for, be carefull with Oracle RAC (their cluster) - it is known to be "problematic" (to say it finely). SQL Server is known to be a lot cheaper, scale a lot worse (no "RAC" option) but basically work without making admins want to commit suicide every hour (the "RAC" option seems to do that). Scalability "a lot worse" still is good enough for the Terra Server (http://msdn.microsoft.com/en-us/library/aa226316(SQL.70).aspx)
THere wer some questions here recently of people having problems rebuilding indices on a 10gb database or something.
So much for my 2 cents. I am sure some MySQL specialists will jump in on issues there.

Best storage engine for constantly changing data

I currently have an application that is using 130 MySQL table all with MyISAM storage engine. Every table has multiple queries every second including select/insert/update/delete queries so the data and the indexes are constantly changing.
The problem I am facing is that the hard drive is unable to cope, with waiting times up to 6+ seconds for I/O access with so many read/writes being done by MySQL.
I was thinking of changing to just 1 table and making it memory based. I've never used a memory table for something with so many queries though, so I am wondering if anyone can give me any feedback on whether it would be the right thing to do?
One possibility is that there may be other issues causing performance problems - 6 seconds seems excessive for CRUD operations, even on a complex database. Bear in mind that (back in the day) ArsDigita could handle 30 hits per second on a two-way Sun Ultra 2 (IIRC) with fairly modest disk configuration. A modern low-mid range server with a sensible disk layout and appropriate tuning should be able to cope with quite a substantial workload.
Are you missing an index? - check the query plans of the slow queries for table scans where they shouldn't be.
What is the disk layout on the server? - do you need to upgrade your hardware or fix some disk configuration issues (e.g. not enough disks, logs on the same volume as data).
As the other poster suggests, you might want to use InnoDB on the heavily written tables.
Check the setup for memory usage on the database server. You may want to configure more cache.
Edit: Database logs should live on quiet disks of their own. They use a sequential access pattern with many small sequential writes. Where they share disks with a random access work load like data files the random disk access creates a big system performance bottleneck on the logs. Note that this is write traffic that needs to be completed (i.e. written to physical disk), so caching does not help with this.
I've now changed to a MEMORY table and everything is much better. In fact I now have extra spare resources on the server allowing for further expansion of operations.
Is there a specific reason you aren't using innodb? It may yield better performance due to caching and a different concurrency model. It likely will require more tuning, but may yield much better results.
should-you-move-from-myisam-to-innodb
I think that that your database structure is very wrong and needs to be optimised, has nothing to do with the storage

Is MySQL appropriate for a read-heavy database with 3.5m+ rows? If so, which engine?

My experience with databases is with fairly small web applications, but now I'm working with a dataset of voter information for an entire state. There are approximately 3.5m voters and I will need to do quite a bit of reporting on them based on their address, voting history, age, etc. The web application itself will be written with Django, so I have a few choices of database including MySQL and PostgreSQL.
In the past I've almost exclusively used MySQL since it was so easily available. I realize that 3.5m rows in a table isn't really all that much, but it's the largest dataset I've personally worked with, so I'm out of my personal comfort zone. Also, this project isn't a quickie throw-away application though, so I want to make sure I choose the best database for the job and not just the one I'm most comfortable with.
If MySQL is an appropriate tool for the job I would also like to know if it makes sense to use InnoDB or MyISAM. I understand the basic differences between the two, but some sources say to use MyISAM for speed but InnoDB if you want a "real" database, while others say all modern uses of MySQL should use InnoDB.
Thanks!
I've run DB's far bigger than this on mysql- you should be fine. Just tune your indexes carefully.
InnoDB supports better locking semantics, so if there will be occasional or frequent writes (or if you want better data integrity), I'd suggest starting there, and then benchmarking myisam later if you can't hit your performance targets.
MyISAM only makes sense if you need speed so badly that you're willing to accept many data integrity issues downsides to achieve it. You can end up with database corruption on any unclean shutdown, there's no foreign keys, no transactions, it's really limited. And since 3.5 million rows on modern hardware is a trivial data set (unless your rows are huge), you're certainly not at the point where you're forced to optimize for performance instead of reliability because there's no other way to hit your performance goals--that's the only situation where you should have to put up with MyISAM.
As for whether to choose PostgreSQL instead, you won't really see a big performance difference between the two on an app this small. If you're familiar with MySQL already, you could certainly justify just using it again to keep your learning curve down.
I don't like MySQL because there are so many ways you can get bad data into the database where PostgreSQL is intolerant of that behavior (see Comparing Speed and Reliability), the bad MyISAM behavior is just a subset of the concerns there. Given how fractured the MySQL community is now and the uncertainties about what Oracle is going to do with it, you might want to consider taking a look at PostgreSQL just so you have some more options here in the future. There's a lot less drama around the always free BSD licensed PostgreSQL lately, and while smaller at least the whole development community for it is pushing in the same direction.
Since it's a read-heavy table, I will recommend using MyISAM table type.
If you do not use foreign keys, you can avoid the bugs like this and that.
Backing up or copying the table to another server is as simple as coping frm, MYI and MYD files.
If you need to compute reports and complex aggregates, be aware that postgres' query optimizer is rather smart and ingenious, wether the mysql "optimizer" is quite simple and dumb.
On a big join the difference can be huge.
The only advantage MySQL has is that it can hit the indexes without hitting the tables.
You should load your dataset in both databases and experiment the biger queries you intend to run. It is better to spend a few days of experimenting, rather than be stuck with the wrong choice.

How to scale MySQL with multiple machines?

I have a web app running LAMP. We recently have an increase in load and is now looking at solutions to scale. Scaling apache is pretty easy we are just going to have multiple multiple machines hosting it and round robin the incoming traffic.
However, each instance of apache will talk with MySQL and eventually MySQL will be overloaded. How to scale MySQL across multiple machines in this setup? I have already looked at this but specifically we need the updates from the DB available immediately so I don't think replication is a good strategy here? Also hopefully this can be done with minimal code change.
PS. We have around a 1:1 read-write ratio.
There're only two strategies: replication and sharding. Replication comes often in place when you have less write and much read traffic, so you can redirect the reads to many slaves, with the pitfall of lots of replication traffic with the time and a probability for inconsitency.
With sharding you shard your database tables across multiple machines (called functional sharding), which makes especially joins much harder. If this doenst fit anymore you also need to shard you rows across multiple machines, but this is no fun and depends a sharding layer implemented between you application and the database.
Document oriented databases or column stores do this work for you, but they are currently optimized for OLAP not for OLTP.
Depends on the application backend (i.e. how the PKs, transactions and insert IDs are handled), you might consider MASTER-MASTER replication with different auto_increment setups. This can be tricky and needs to be thoroughly tested but it can work.
Also, in new MySQL 5.6 there is a GTID (Global Transaction Identifier) that generally helps a lot in keeping the replication in sync, especially in this scenario.
You should take a look at MySQL Performance Blog. Maybe you'll find something useful.
Well... good luck scaling all those writes to a real large scale. The database engine becomes the bottleneck, too many locks and buffers mgmt and stuff...
The only way I found that really works is scale out, sharding, unfortunately sharding is not provided for MySQL "out of the box" (like in some NoSQLs such as Mongo). ScaleBase (disclaimer: I work there) is a maker of a complete scale-out solution an "automatic sharding machine" if you like. ScaleBae analyzes your data and SQL stream, splits the data across DB nodes, route commands and aggregates results in runtime – so you won’t have to!