I am creating a MATLAB package using object-oriented programming. I have documented my classes according to a tutorial from MathWorks website. This standard of documentation, however, only works for doc and help commands, but not when I use publish. For example, properties, which have their description written in front of their declaration, don't have said declaration exported to HTML. There is no list of properties or methods at the beginning of the file, so that users can quickly skip to those. Lastly, documentation has to be read directly from the comments in the code, instead of being parsed to HTML.
When I try to add some HTML documentation inside my classes to publish them, the code also appears on doc and help, which is an undesired behavior. Is there a way to create class documentation so that properties and methods can be published to the Web? I've had experience with doc generators like Sphinx (Python) and Doxygen (many languages), in which the descriptions of classes, methods and properties are parsed to HTML so they can be published in places like Read the Docs or GitHub Pages so I am curious to know if MATLAB has something like that.
You can give a try to MTOC++ which uses Doxygen, therefore produces the standard Doxygen HTML documentation.
I have used it already to generate source code documentation for Matlab project containing standard Matlab functions, old class definitions with # notation and classes defined by classdef mixed, and it worked after some tailoring.
This somewhat larger project allows to create documentation for MatLab
files and classes (including packages) using a doxygen filter named
mtoc++. Moreover, a tool/class named MatlabDocMaker allows to create
the documentation from within MatLab. For Windows, Mac and Unix!
You can find it also on Mathworks File Exchange and you can find the documentation here.
One widely-used way to provide HTML documentation for MATLAB functions/class is the M2HTML project. It will automatically generate HTML documentation complete with dependency graphs, source code, and syntax highlighting.
There are several packages out there that help in automating the task of writing bindings between C\C++ and other languages.
In my case, I'd like to bind Python, some options for such packages are: SWIG, Boost.Python and Robin.
It seems that the straight forward process is to use these packages to create C\C++ linkable libraries (with mostly static functions) and have the higher language be extended using them.
However, my situation is that I already have a developed working system in C++ therefore plan to embed Python into it so that future development will be in Python.
It's not clear to me how, and if at all possible, to use these packages in helping to extend embedded Python in such a way that the Python code would be able to interact with the various Singleton instances already running in the system, and instantiate C++ classes and interact with them.
What I'm looking for is an insight regarding the design best fitted for this situation.
Boost.python lets you do a lot of those things right out of the box, especially if you use smart pointers. You can even inherit from C++ classes in Python, then pass instances of those back to your C++ code and have everything still work. My favorite resource on how to do various stuff is this (especially check out the "How To" section): http://wiki.python.org/moin/boost.python/ .
Boost.python is especially good if you're using smart pointers or intrusive pointers, as those translate transparently into PyObject reference counting. Also, it's very good at making factory functions look like Python constructors, which makes for very clean Python APIs.
If you're not using smart pointers, it's still possible to do all the things you want, but you have to mess with various return and lifetime policies, which can give you a headache.
To make it short: There is the modern alternative pybind11.
Long version: I also had to embed python. The C++ Python interface is small so I decided to use the C Api. That turned out to be a nightmare. Exposing classes lets you write tons of complicated boilerplate code. Boost::Python greatly avoids this by using readable interface definitions. However I found that boost lacks a sophisticated documentation and dor some things you still have to call the Python api. Further their build system seems to give people troubles. I cant tell since i use packages provided by the system. Finally I tried the boost python fork pybind11 and have to say that it is really convenient and fixes some shortcomings of boost like the necessity of the use of the Python Api, ability to use lambdas, the lack of an easy comprehensible documentation and automatic exception translation. Further it is header only and does not pull the huge boost dependency on deployment, so I can definitively recommend it.
This question already has answers here:
What is the difference between a framework and a library? [closed]
(22 answers)
Closed 6 years ago.
What is the difference between a Framework, a Toolkit and a Library?
The most important difference, and in fact the defining difference between a library and a framework is Inversion of Control.
What does this mean? Well, it means that when you call a library, you are in control. But with a framework, the control is inverted: the framework calls you. (This is called the Hollywood Principle: Don't call Us, We'll call You.) This is pretty much the definition of a framework. If it doesn't have Inversion of Control, it's not a framework. (I'm looking at you, .NET!)
Basically, all the control flow is already in the framework, and there's just a bunch of predefined white spots that you can fill out with your code.
A library on the other hand is a collection of functionality that you can call.
I don't know if the term toolkit is really well defined. Just the word "kit" seems to suggest some kind of modularity, i.e. a set of independent libraries that you can pick and choose from. What, then, makes a toolkit different from just a bunch of independent libraries? Integration: if you just have a bunch of independent libraries, there is no guarantee that they will work well together, whereas the libraries in a toolkit have been designed to work well together – you just don't have to use all of them.
But that's really just my interpretation of the term. Unlike library and framework, which are well-defined, I don't think that there is a widely accepted definition of toolkit.
Martin Fowler discusses the difference between a library and a framework in his article on Inversion of Control:
Inversion of Control is a key part of
what makes a framework different to a
library. A library is essentially a
set of functions that you can call,
these days usually organized into
classes. Each call does some work and
returns control to the client.
A framework embodies some abstract
design, with more behavior built in.
In order to use it you need to insert
your behavior into various places in
the framework either by subclassing or
by plugging in your own classes. The
framework's code then calls your code
at these points.
To summarize: your code calls a library but a framework calls your code.
Diagram
If you are a more visual learner, here is a diagram that makes it clearer:
(Credits: http://tom.lokhorst.eu/2010/09/why-libraries-are-better-than-frameworks)
The answer provided by Barrass is probably the most complete. However, the explanation could easily be stated more clearly. Most people miss the fact that these are all nested concepts. So let me lay it out for you.
When writing code:
eventually you discover sections of code that you're repeating in your program, so you refactor those into Functions/Methods.
eventually, after having written a few programs, you find yourself copying functions you already made into new programs. To save yourself time you bundle those functions into Libraries.
eventually you find yourself creating the same kind of user interfaces every time you make use of certain libraries. So you refactor your work and create a Toolkit that allows you to create your UIs more easily from generic method calls.
eventually, you've written so many apps that use the same toolkits and libraries that you create a Framework that has a generic version of this boilerplate code already provided so all you need to do is design the look of the UI and handle the events that result from user interaction.
Generally speaking, this completely explains the differences between the terms.
Introduction
There are various terms relating to collections of related code, which have both historical (pre-1994/5 for the purposes of this answer) and current implications, and the reader should be aware of both, particularly when reading classic texts on computing/programming from the historic era.
Library
Both historically, and currently, a library is a collection of code relating to a specific task, or set of closely related tasks which operate at roughly the same level of abstraction. It generally lacks any purpose or intent of its own, and is intended to be used by (consumed) and integrated with client code to assist client code in executing its tasks.
Toolkit
Historically, a toolkit is a more focused library, with a defined and specific purpose. Currently, this term has fallen out of favour, and is used almost exclusively (to this author's knowledge) for graphical widgets, and GUI components in the current era. A toolkit will most often operate at a higher layer of abstraction than a library, and will often consume and use libraries itself. Unlike libraries, toolkit code will often be used to execute the task of the client code, such as building a window, resizing a window, etc. The lower levels of abstraction within a toolkit are either fixed, or can themselves be operated on by client code in a proscribed manner. (Think Window style, which can either be fixed, or which could be altered in advance by client code.)
Framework
Historically, a framework was a suite of inter-related libraries and modules which were separated into either 'General' or 'Specific' categories. General frameworks were intended to offer a comprehensive and integrated platform for building applications by offering general functionality, such as cross platform memory management, multi-threading abstractions, dynamic structures (and generic structures in general). Historical general frameworks (Without dependency injection, see below) have almost universally been superseded by polymorphic templated (parameterised) packaged language offerings in OO languages, such as the STL for C++, or in packaged libraries for non-OO languages (guaranteed Solaris C headers). General frameworks operated at differing layers of abstraction, but universally low level, and like libraries relied on the client code carrying out it's specific tasks with their assistance.
'Specific' frameworks were historically developed for single (but often sprawling) tasks, such as "Command and Control" systems for industrial systems, and early networking stacks, and operated at a high level of abstraction and like toolkits were used to carry out execution of the client codes tasks.
Currently, the definition of a framework has become more focused and taken on the "Inversion of Control" principle as mentioned elsewhere as a guiding principle, so program flow, as well as execution is carried out by the framework. Frameworks are still however targeted either towards a specific output; an application for a specific OS for example (MFC for MS Windows for example), or for more general purpose work (Spring framework for example).
SDK: "Software Development Kit"
An SDK is a collection of tools to assist the programmer to create and deploy code/content which is very specifically targeted to either run on a very particular platform or in a very particular manner. An SDK can consist of simply a set of libraries which must be used in a specific way only by the client code and which can be compiled as normal, up to a set of binary tools which create or adapt binary assets to produce its (the SDK's) output.
Engine
An Engine (In code collection terms) is a binary which will run bespoke content or process input data in some way. Game and Graphics engines are perhaps the most prevalent users of this term, and are almost universally used with an SDK to target the engine itself, such as the UDK (Unreal Development Kit) but other engines also exist, such as Search engines and RDBMS engines.
An engine will often, but not always, allow only a few of its internals to be accessible to its clients. Most often to either target a different architecture, change the presentation of the output of the engine, or for tuning purposes. Open Source Engines are by definition open to clients to change and alter as required, and some propriety engines are fixed completely. The most often used engines in the world however, are almost certainly JavaScript Engines. Embedded into every browser everywhere, there are a whole host of JavaScript engines which will take JavaScript as an input, process it, and then output to render.
API: "Application Programming Interface"
The final term I am answering is a personal bugbear of mine: API, was historically used to describe the external interface of an application or environment which, itself was capable of running independently, or at least of carrying out its tasks without any necessary client intervention after initial execution. Applications such as Databases, Word Processors and Windows systems would expose a fixed set of internal hooks or objects to the external interface which a client could then call/modify/use, etc to carry out capabilities which the original application could carry out. API's varied between how much functionality was available through the API, and also, how much of the core application was (re)used by the client code. (For example, a word processing API may require the full application to be background loaded when each instance of the client code runs, or perhaps just one of its linked libraries; whereas a running windowing system would create internal objects to be managed by itself and pass back handles to the client code to be utilised instead.
Currently, the term API has a much broader range, and is often used to describe almost every other term within this answer. Indeed, the most common definition applied to this term is that an API offers up a contracted external interface to another piece of software (Client code to the API). In practice this means that an API is language dependent, and has a concrete implementation which is provided by one of the above code collections, such as a library, toolkit, or framework.
To look at a specific area, protocols, for example, an API is different to a protocol which is a more generic term representing a set of rules, however an individual implementation of a specific protocol/protocol suite that exposes an external interface to other software would most often be called an API.
Remark
As noted above, historic and current definitions of the above terms have shifted, and this can be seen to be down to advances in scientific understanding of the underlying computing principles and paradigms, and also down to the emergence of particular patterns of software. In particular, the GUI and Windowing systems of the early nineties helped to define many of these terms, but since the effective hybridisation of OS Kernel and Windowing system for mass consumer operating systems (bar perhaps Linux), and the mass adoption of dependency injection/inversion of control as a mechanism to consume libraries and frameworks, these terms have had to change their respective meanings.
P.S. (A year later)
After thinking carefully about this subject for over a year I reject the IoC principle as the defining difference between a framework and a library. There ARE a large number of popular authors who say that it is, but there are an almost equal number of people who say that it isn't. There are simply too many 'Frameworks' out there which DO NOT use IoC to say that it is the defining principle. A search for embedded or micro controller frameworks reveals a whole plethora which do NOT use IoC and I now believe that the .NET language and CLR is an acceptable descendant of the "general" framework. To say that IoC is the defining characteristic is simply too rigid for me to accept I'm afraid, and rejects out of hand anything putting itself forward as a framework which matches the historical representation as mentioned above.
For details of non-IoC frameworks, see, as mentioned above, many embedded and micro frameworks, as well as any historical framework in a language that does not provide callback through the language (OK. Callbacks can be hacked for any device with a modern register system, but not by the average programmer), and obviously, the .NET framework.
A library is simply a collection of methods/functions wrapped up into a package that can be imported into a code project and re-used.
A framework is a robust library or collection of libraries that provides a "foundation" for your code. A framework follows the Inversion of Control pattern. For example, the .NET framework is a large collection of cohesive libraries in which you build your application on top of. You can argue there isn't a big difference between a framework and a library, but when people say "framework" it typically implies a larger, more robust suite of libraries which will play an integral part of an application.
I think of a toolkit the same way I think of an SDK. It comes with documentation, examples, libraries, wrappers, etc. Again, you can say this is the same as a framework and you would probably be right to do so.
They can almost all be used interchangeably.
very, very similar, a framework is usually a bit more developed and complete then a library, and a toolkit can simply be a collection of similar librarys and frameworks.
a really good question that is maybe even the slightest bit subjective in nature, but I believe that is about the best answer I could give.
Library
I think it's unanimous that a library is code already coded that you can use so as not to have to code it again. The code must be organized in a way that allows you to look up the functionality you want and use it from your own code.
Most programming languages come with standard libraries, especially some code that implements some kind of collection. This is always for the convenience that you don't have to code these things yourself. Similarly, most programming languages have construct to allow you to look up functionality from libraries, with things like dynamic linking, namespaces, etc.
So code that finds itself often needed to be re-used is great code to be put inside a library.
Toolkit
A set of tools used for a particular purpose. This is unanimous. The question is, what is considered a tool and what isn't. I'd say there's no fixed definition, it depends on the context of the thing calling itself a toolkit. Example of tools could be libraries, widgets, scripts, programs, editors, documentation, servers, debuggers, etc.
Another thing to note is the "particular purpose". This is always true, but the scope of the purpose can easily change based on who made the toolkit. So it can easily be a programmer's toolkit, or it can be a string parsing toolkit. One is so broad, it could have tool touching everything programming related, while the other is more precise.
SDKs are generally toolkits, in that they try and bundle a set of tools (often of multiple kind) into a single package.
I think the common thread is that a tool does something for you, either completely, or it helps you do it. And a toolkit is simply a set of tools which all perform or help you perform a particular set of activities.
Framework
Frameworks aren't quite as unanimously defined. It seems to be a bit of a blanket term for anything that can frame your code. Which would mean: any structure that underlies or supports your code.
This implies that you build your code against a framework, whereas you build a library against your code.
But, it seems that sometimes the word framework is used in the same sense as toolkit or even library. The .Net Framework is mostly a toolkit, because it's composed of the FCL which is a library, and the CLR, which is a virtual machine. So you would consider it a toolkit to C# development on Windows. Mono being a toolkit for C# development on Linux. Yet they called it a framework. It makes sense to think of it this way too, since it kinds of frame your code, but a frame should more support and hold things together, then do any kind of work, so my opinion is this is not the way you should use the word.
And I think the industry is trying to move into having framework mean an already written program with missing pieces that you must provide or customize. Which I think is a good thing, since toolkit and library are great precise terms for other usages of "framework".
Framework: installed on you machine and allowing you to interact with it. without the framework you can't send programming commands to your machine
Library: aims to solve a certain problem (or several problems related to the same category)
Toolkit: a collection of many pieces of code that can solve multiple problems on multiple issues (just like a toolbox)
It's a little bit subjective I think. The toolkit is the easiest. It's just a bunch of methods, classes that can be use.
The library vs the framework question I make difference by the way to use them. I read somewhere the perfect answer a long time ago. The framework calls your code, but on the other hand your code calls the library.
In relation with the correct answer from Mittag:
a simple example. Let's say you implement the ISerializable interface (.Net) in one of your classes. You make use of the framework qualities of .Net then, rather than it's library qualities. You fill in the "white spots" (as mittag said) and you have the skeleton completed. You must know in advance how the framework is going to "react" with your code. Actually .net IS a framework, and here is where i disagree with the view of Mittag.
The full, complete answer to your question is given very lucidly in Chapter 19 (the whole chapter devoted to just this theme) of this book, which is a very good book by the way (not at all "just for Smalltalk").
Others have noted that .net may be both a framework and a library and a toolkit depending on which part you use but perhaps an example helps. Entity Framework for dealing with databases is a part of .net that does use the inversion of control pattern. You let it know your models it figures out what to do with them. As a programmer it requires you to understand "the mind of the framework", or more realistically the mind of the designer and what they are going to do with your inputs. datareader and related calls, on the other hand, are simply a tool to go get or put data to and from table/view and make it available to you. It would never understand how to take a parent child relationship and translate it from object to relational, you'd use multiple tools to do that. But you would have much more control on how that data was stored, when, transactions, etc.
I'm having trouble finding good advice and common practices for the use of namespaces in Clojure. I realize that namespaces are not the same as Java packages so I'm trying to tease out the conventions in Clojure, which seem surprisingly hard to determine.
I think I have a pretty good idea how to split functions into clj files and even roughly how I'd want to organize those files into directories. But beyond that I'm having trouble finding the mechanics for my dev environment. Some inter-related questions:
Do I use the same uniqueness conventions for Clojure namespaces as I would normally use for Java packages? [ie backwards-company-domain.project.subsystem]
Should I save my files in a directory structure that matches my namespaces? [ala Java]
If I have multiple namespaces, do I need to compile all of my code into a jar and add it to my classpath to make it accessible?
Should each namespace compile to one jar? Or should I create a single jar that contains clj code from many namespaces?
Thanks...
I guess it's ok if you think it helps, but many Clojure projects don't do so -- cf. Compojure (using a top-level compojure ns and various compojure.* ns's for specific functionality), Ring, Leiningen... Clojure itself uses clojure.* (and clojure.contrib.* for contrib libraries), but that's a special case, I suppose.
Yes! You absolutely must do so, or else Clojure won't be able to find your namespaces. Also note that you musn't use the underscore in namespace names or the hyphen in filenames and wherever you use a hyphen in a namespace name, you must use an underscore in the filename (so that the ns my.cool-project is defined in a file called cool_project.clj in a directory called my).
You need to make sure all your stuff is on the classpath, but it doesn't matter if it's in a jar, multiple jars, a mixture of jars and directories on the filesystem... As long as it obeys the correct naming conventions (your point no. 2) you should be fine.
However, do not compile things ahead-of-time if there's no particular reason to do so -- this may prevent your code from being portable across various versions of Clojure without providing any benefits besides a slightly improved loading time.
You'll still need to use AOT compilation sometimes, notably in some Java interop scenarios -- the documentation of the relevant functions / macros always mentions that. There are examples of things requiring AOT in clojure.contrib; I've never needed it, so I can't provide much in the way of details.
I'd say you should use jars for functional units of code. E.g. Compojure and Ring get packaged as single jars containing many namespaces which together compose the whole package. Also, clojure.contrib is notably packaged as a single jar with multiple unrelated libraries; but that again may be a special case.
On the other hand, a single jar containing all of your project's code together with its dependencies might occasionally be useful for deployment. Check out the Leiningen build tool and its 'uberjar' facility if you think that sort of thing may be useful to you.
Strictly speaking, not necessary, though many Java projects have dropped that convention as well, especially for internal projects or private APIs. Do avoid single-segment namespaces though, which would result in classfiles being generated in the default package.
Yes.
Regarding 3 & 4, packaging and AOT compilation are entirely orthogonal to the question of namespace conventions.
I spent this morning in trying to figure out where the system.linq.expressions namespace is. The following is what I did:
In VS 2008, Create a new C#/Smart Device/Windows Mobile 6 Professional SDK/.NET CF v3.5/Class Library
Used SqlMetal (in Program Files/Microsoft SDKs/Windows/v6.0A/Bin) to generate the data context.
Added the data context .cs file into the project.
Compile and many errors for missing namespaces: System.Data.Linq, System.Data.Linq.Mapping, System.Linq.Expressions
After some research added System.Data.Linq.dll in c:\Program Files\Reference Assemblies\Microsoft\Framework\v3.5 (The dll was not directly listed when I choose to add reference and I used "browse" tab to finally located the one, which is for normal framework)
Compile again, less errors, but still System.Linq.Expressions namespace is missing.
The document says System.Linq.Expressions is in System.Core.dll but it seems my System.Core.dll (located in Program Files\Microsoft.NET\SDK\CompactFramework\v3.5\WindowsCE) contains much less namespace than document says.
Thanks in advance!
The Compact Framework does not support LINQ to SQL. All objects in the documentation for System.Data.Linq confirms this by being completely devoid of the "supported in the CF" icon. For example, look over at the docs for DataTable, which is supported. You'll see a little icon by each supported method/property.
You cannot "add" support by simply referencing a desktop assembly like you did in your step 5. The CF cannot consume full framework assemblies, for a variety of reasons.
Dynamic code generation (Reflection.Emit) is not available in NETCF. What this means is that a lot of features that depend on this is not available, this includes DLR (dyanmic language runtime and hence languages like IronRuby), Linq-to-SQL/
If you just want the Linq.Expressions and you are doing your own stuff with it i.e. not trying to get linq to sql working then you can use the System.Linq.Expression stuff from the db4o guys.
I am using it on my project using linq to objects.
db4o linq implementation