Metastore(Mysql) bottleneck for Hive [migrated] - mysql

This question was migrated from Stack Overflow because it can be answered on Database Administrators Stack Exchange.
Migrated 4 days ago.
We have a hive installation that has MariaDB as metastore database. MariaDB has around ~250 GB metadata with ~100GB indexes. It becomes terribly slow during the peak load of 40-60K QPS.
Looking from the community to share similar experiences if any and what they did to scale out the meta store or fix it?
Some of the ideas i am looking at currently are:
Application Caching at HMS level: Didn't found out of box capability in my current v2.0.1. Is there support for it in higher versions?
Read replicas and routing SELECTS to it: Facing some failure if there is replication lag and i am trying to read back the value.
Horizontal sharding of Mysql: founding it way complex. Saw some recommendations of TiDB but not sure of its experience.

An answer to this would greatly depend on things such as the type of workload (percentage of reads vs writes, etc.), it also depends on your hardware. From your opening question it seems like the data is time critical (once data is committed it should be read).
There are several approaches you can take including:
Application level caching, or a caching layer such as Memcached / Redis
MariaDB Galera cluster with a load balancer for the read loads
Sharding such as Spider engine
Tuning your data / schemas / database for the workload
If you don't have the resources to try these things out on a simulated identical setup then I recommend getting some kind of MariaDB consulting services involved. These services will help you make the best decisions for your specific workload. There are many companies out there who will provide this (including MariaDB Corporation themselves).
Edit: Declaration requested... I declare that I am not affiliated with MariaDB Corporation. I work for the MariaDB Foundation which is an independent non-profit entity.

Related

Data Base for handle large data

We have started a new project using MySQL, spring boot, and Angular js. Initially, we did not realize our DB is going to handle large data.
The number of tables will not be large (<130), only 10 to 20 tables will be contained in more data, which is almost inserted/ read/ update.
The estimated amount of data in that 10 table is going to grow at 12,00,000 records in a month, and we should not delete those data be able to do various reports.
There needs to be (read-only) replicated database as a backup/failover, and maybe for offloading reports in peak time.
I don't have first-hand experience with that large databases, so I'm asking the ones that have which DB is the best choice in this situation. as we have completed 100% coding and development but now we realize this. I have doubts may be MYSQL going to handle large data. I know that Oracle is the safe bet, interested if Mysql with a similar setup. But it is bound only in MySQL I am ok with any DB based on you all feedback I can take a call.
Open source DB more preferable but it's not mandatory we can go for paid DB also.
Handling Large Data
MySQL is more than capable of handling such loads. In fact, it is capable of handling much much more load than what you are talking about. You just have to create the right kind of tables. You can do that by choosing
the correct storage engine for your use-case
the correct character set
the optimal data type for your column
the right indexing strategy - creating indexes thoughtfully
the right partitioning strategy (if the data in the table exceeds tens of millions of records)
EDIT: You've also got to choose the right kind of data modelling and normalization strategy for your use-case. Most of OLTP applications require some level of normalization. But if you want to do analytics and aggregates on heavy tables, you should either have a Data Warehouse of have highly denormalized tables to avoid joins and/or have a column-oriented database to support such queries.
MySQL is open-source and has a very strong community support so you will find a lot of literature around any issue that you face. You can also find all the filed bugs (resolved and unresolved) here.
As far as the number of tables are concerned, there's really no cap on that. See here, MySQL permits 4 billion tables if you're using InnoDB as the engine.
A lot of very big companies with scale use MySQL in some capacity. Facebook is one of them.
Native JSON Support
With the growing popularity of JSON as the de facto data exchange format across the internet, MySQL has also provided native JSON support in 5.7, so now you can store and query JSON from your APIs, if required.
HA and Replication
MySQL Replication works! Earlier, MySQL used to support coordinate replication only but now it supports GTID replication which makes it easier to maintain and fix replication issues. There are third-party replicators also available in the market. For instance, Continuent's Tungsten is a replicator written in Java and is a replacement for native replication. It comes with a lot of configuration options which are not available with native MySQL replication.
I agree with MontyPython, MySql can do it and the design is critical. Fortunately MySql allows you to be flexible over time as needed.
I've had history tables needed used in daily reporting that grew to over a billion records in plain MySql and had no problems.
I've also used MySql Merge tables to divide up tables with big-ish rows (100KB+) to speed things up. Basically keeping the individual merge table file sizes under 30GB each. However that solution increases the open file count (in the system) per client - might be a bigger deal on a clustered system. That one was not.
That said, I like to give Honorable Mention to:
MariaDB - MySql but with contributions from Facebook, Alibaba, Google, and more.
I've moved most of my MySql community edition projects over to MariaDB and have been very happy. It's an almost transparent upgrade.
They offer an interesting enterprise Big Data Analytics (MariaDB AX) package, but with your current requirements its probably overkill and the standard community edition will fulfill your needs.
For example, here's an informative tutorial on how to set up a scalable Cluster (Galera) and adding MaxScale for High Availability:
https://mariadb.com/resources/blog/getting-started-mariadb-galera-and-mariadb-maxscale-centos
Another interesting option is Vitesse - developed at Youtube, which allows for sharded mysql through a (mostly) driver based solution. It solves the problem of needing to have available access to huge amounts of data and always yield good performance. As such, it goes beyond high availability and focuses on a solution wherein no single query (ie. a report against millions of rows of historical data) can negatively impact the other queries needing to be performed.

Amazon Linux EC2 Webserver / MYSQL Upgrade – Traffic causing error establishing a database connection

To give you a little background, I currently have a website that allows users to upload photos. The website was initially on a GoDaddy shared server, but recent surges in traffic have forced me to explore other options. During peak hours, the site contains 400+ active visitors, which when combined with user uploads, forces the shared server to shut down.
I have a small amount of experience with setting up servers through AWS and attempted to place the website on a c1.medium instance, Amazon Linux. The website along with the MYSQL Database is on the same instance. While I have read that this is in general frowned upon, I have similarly read that moving the database to another instance would not significantly increase speeds. Unfortunately, the c1.medium instance also was unable to support the traffic and I soon received an error Establishing a Database connection. The site does load on occasion, so the problem stems from the traffic load and not an actual problem with the database.
My question is whether the problem revolves solely around MySQL? The database itself when backed up is around 250MB. Is the issue caused by input / output requests to the database? I read posts with people with similar problems in which they stated that installing MySQL 5.6 solved the problem, but also have read that MySQL 5.6 is slower than MySQL 5.5, which is my current version.
After conducting some preliminary research I started to believe that I could resolve the problem by increasing the IPOS of the EBS. Originally I had it set the IPOS as standard, but changed it to Provisioned IOPS and 30x the size of the EBS (i.e., 60GB – 1800 IOPS). This once again appeared to have little impact. Do I need to upgrade my instance? What measures should I be focused on when deciding on the instance? It appears that the cheapest instance with high network performance and EBS optimized would be c3.xlarge. Suggestions?
Several things to consider:
1)Separate the database server from the web server
Your database should not share resources with your web server. They will both perform poorly as the result.
It is easier to find what the bottle-neck is.
2) Upgrade to MySQL 5.6
In all the benchmarks that I have seen and done 5.6 performs better than 5.5
3) Configure your database to take advantage of your resources
Depending on the storage engine and the memory allocated in your machine configure MySQL for example set innodb_buffer_pool_size to 70% of the (DEDICATED) RAM
4) Monitor MySQL and check slow query log
Slow query log shows the queries that are slow and inefficient
5) Learn to use EXPLAIN
EXPLAIN shows query plan in MySQL run EXPLAIN on slow queries to tune them
6) Use Key-Value Stores to Cache queries
Using Memcached or Redis cache queries so they don't hit your database and return repeated queries from the memory
7) Increasing IOPS and Scaling Out
Increasing IOPS and getting better hardware helps but using efficient queries is much more effective. Queries and application most of the time are a greater contributing factor to performance problems
8) Replication
To help with concurrency consider moving to a MySQL Master/Slave replication , if you still had issues.
Final Note: use EBS because the storage on EC2 is ephemeral and will not persistent.
We recently did extensive research on the performance bottlenecks associated with massive end-user peaks across our global customer base, and the analysis actually indicates the database as - by far - the most frequent cause of slowdowns or even crashes. The report (https://queue-it.com/trend-report) includes best practice advice from our customers on how to improve the situation, which you may find helpful.

Database and DB engine for social website

For a heavy user content website with user profiles, live feeds, photo /video/content sharing, etc what DB to use, and what DB engine? Ofcourse Oracle/Microsoft sql are out because they are not free (or cheap). I am using MySQL with MyISAM but that will run into performance issues on a social site. Even using InnoDB may not help performance. So firstly which DB is better to use and which engine - starting from Free to paid?
Main concern is with live feeds performance, plus there is lots of data tracking and mining with analytic.
Since this is a startup - hardware costs are limited so no hardware farm here to support performance, hence seeking a decent alternative for the first 2 years atleast.
If you are a start-up, you may be able to afford Microsoft's stuff after all. Check out their BizSPark program which gives you software for free for a few years.
I am not sure that I agree that MySQL is not your best option though. Doesn't FaceBook use MySQL? Are you expecting to be bigger?
If you think that InnoDB will be too slow for you, there are other storage engine options on MySQL. For example, have you investigated TokuDB?
Have you considered a hosting service like Linode.com instead of your own hardware? This might be a better fit for your cashflow profile. If you really feel the DB load is onerous, you could have dedicated or multiple servers. Start with a dedicated DB box and scale up from there. You could also go with a cloud service like Amazon EC2.
EDIT: I just realized that Tokutek have a social networking case study:
http://tokutek.com/customers/a-social-networking-case-study/
It sounds to me like you are unlikely to outgrow MySQL any time soon. If you grow busy enough to need anything like TokuDB you can thank me with a few shares. :-)
If your userbase is large enough to require a high-performance DB, your bandwidth and storage charges will not be cheap; why skimp on the database?
MS SQL has free and/or cheap editions which are performance-inhibited. I always start with them, and if the site takes off, I upgrade. Probably Oracle offers something similar.
Edit: I should have said at the start that you're unlikely to outgrow MySQL anytime soon, and that this whole question might be a case of premature optimization.
I would recommend getting a cloud account for the files and potentially a dedicated server for the DB (MySQL and MyISAM).
You can limit your cost on the cloud storing the files, but enhance performance by having a dedicated server for the DB by increasing processing power and memory.

Upgrading from MySQL 4.1 to 5.0 - What kind of performance changes (good or bad) can we expect?

Currently have approximately 2000 simultaneouse connections. We average approximately 425 reads and writes per second. We have a read to write ration of 3:1. All of our tables are myisam. Can we expect better or worse performance when we go from mysql 4.1.22 to 5.0?
There's no way for anyone here to tell you without the schema, queries and test data.
Why not setup a dev environment on 5.0 and testing it out?
The main concern should be that the 5.0 Information Schemas, are a HUGE vulnerability and can be used to very easily gain access to the SQL server from remote locations simply by printing off the schema using injection will let an unwanted viewer, view all of the tables and capitalize off the knowledge to get passwords using the same schema for its columns.
The MySQL source tree includes a set of benchmark tests written as Perl scripts. See The MySQL Benchmark Suite for some information. You can download the source distribution for MySQL 5.0.91 at the archives.
Source distribution of MySQL 4.1 doesn't seem to be easily available anymore. You might have to check it old sources from LaunchPad unless you can find a copy of an old source distribution elsewhere on the internet.
However, the comparison that these benchmarks show is only of general interest. It may be irrelevant to how your application performs. For instance, your usage of the database may not take advantage of some performance improvements in MySQL 5.0, but it may run into some regressions in MySQL 5.0 that were necessary.
The only way to get an answer that is relevant to your application is to try the new software with a test instance of your application, using a sample of data that is a realistic model of the type and volume of data your application typically deals with. As #BenS says, no one on a site like StackOverflow can give an answer specific to your application.
You say in a comment that you're very concerned about performance, but if you don't have an instance of your application and database that you can run tests on, you aren't doing the work necessary to satisfy this concern.
I would strongly suggest moving straight to 5.1.45 with Innodb Support. Percona provides an excellent version with XtraDB that provides a number of performance related improvements. Moving off of your MyISAM tables and onto Innodb will provide a huge performance increase in almost all cases. If you are going to burn the QA/Testing time to move, do a full move now, not a half-way step.

Which database has the best support for replication

I have a fairly good feel for what MySQL replication can do. I'm wondering what other databases support replication, and how they compare to MySQL and others?
Some questions I would have are:
Is replication built in, or an add-on/plugin?
How does the replication work (high-level)? MySQL provides statement-based replication (and row-based replication in 5.1). I'm interested in how other databases compare. What gets shipped over the wire? How do changes get applied to the replicas?
Is it easy to check consistency between master and slaves?
How easy is it to get a failed replica back in sync with the master?
Performance? One thing I hate about MySQL replication is that it's single-threaded, and replicas often have trouble keeping up, since the master can be running many updates in parallel, but the replicas have to run them serially. Are there any gotchas like this in other databases?
Any other interesting features...
MySQL's replication is weak inasmuch as one needs to sacrifice other functionality to get full master/master support (due to the restriction on supported backends).
PostgreSQL's replication is weak inasmuch as only master/standby is supported built-in (using log shipping); more powerful solutions (such as Slony or Londiste) require add-on functionality. Archive log segments are shipped over the wire, which are the same records used to make sure that a standalone database is in working, consistent state on unclean startup. This is what I'm using presently, and we have resynchronization (and setup, and other functionality) fully automated. None of these approaches are fully synchronous. More complete support will be built in as of PostgreSQL 8.5. Log shipping does not allow databases to come out of synchronization, so there is no need for processes to test the synchronized status; bringing the two databases back into sync involves setting the backup flag on the master, rsyncing to the slave (with the database still runnning; this is safe), and unsetting the backup flag (and restarting the slave process) with the archive logs generated during the backup process available; my shop has this process (like all other administration tasks) automated. Performance is a nonissue, since the master has to replay the log segments internally anyhow in addition to doing other work; thus, the slaves will always be under less load than the master.
Oracle's RAC (which isn't properly replication, as there's only one storage backend -- but you have multiple frontends sharing the load, and can build redundancy into that shared storage backend itself, so it's worthy of mention here) is a multi-master approach far more comprehensive than other solutions, but is extremely expensive. Database contents aren't "shipped over the wire"; instead, they're stored to the shared backend, which all the systems involved can access. Because there is only one backend, the systems cannot come out of sync.
Continuent offers a third-party solution which does fully synchronous statement-level replication with support for all three of the above databases; however, the commercially supported version of their product isn't particularly cheap (though vastly less expensive. Last time I administered it, Continuent's solution required manual intervention for bringing a cluster back into sync.
I have some experience with MS-SQL 2005 (publisher) and SQLEXPRESS (subscribers) with overseas merge replication. Here are my comments:
1 - Is replication built in, or an add-on/plugin?
Built in
2 - How does the replication work
(high-level)?
Different ways to replicate, from snapshot (giving static data at the subscriber level) to transactional replication (each INSERT/DELETE/UPDATE instruction is executed on all servers). Merge replication replicate only final changes (successives UPDATES on the same record will be made at once during replication).
3 - Is it easy to check consistency between master and slaves?
Something I have never done ...
4 - How easy is it to get a failed replica back in sync with the master?
The basic resynch process is just a double-click one .... But if you have 4Go of data to reinitialize over a 64 Kb connection, it will be a long process unless you customize it.
5 - Performance?
Well ... You will of course have a bottleneck somewhere, being your connection performance, volume of data, or finally your server performance. In my configuration, users only write to subscribers, which all replicate with the main database = publisher. This server is then never sollicited by final users, and its CPU is strictly dedicated to data replication (to multiple servers) and backup. Subscribers are dedicated to clients and one replication (to publisher), which gives a very interesting result in terms of data availability for final users. Replications between publisher and subscribers can be launched together.
6 - Any other interesting features...
It is possible, with some anticipation, to keep on developping the database without even stopping the replication process....tables (in an indirect way), fields and rules can be added and replicated to your subscribers.
Configurations with a main publisher and multiple suscribers can be VERY cheap (when compared to some others...), as you can use the free SQLEXPRESS on the suscriber's side, even when running merge or transactional replications
Try Sybase SQL Anywhere
Just adding to the options with SQL Server (especially SQL 2008, which has Change Tracking features now). Something to consider is the Sync Framework from Microsoft. There's a few options there, from the basic hub-and-spoke architecture which is great if you have a single central server and sometimes-connected clients, right through to peer-to-peer sync which gives you the ability to do much more advanced syncing with multiple 'master' databases.
The reason you might want to consider this instead of traditional replication is that you have a lot more control from code, for example you can get events during the sync progress for Update/Update, Update/Delete, Delete/Update, Insert/Insert conflicts and decide how to resolve them based on business logic, and if needed store the loser of the conflict's data somewhere for manual or automatic processing. Have a look at this guide to help you decide what's possible with the different methods of replication and/or sync.
For the keen programmers the Sync Framework is open enough that you can have the clients connect via WCF to your WCF Service which can abstract any back-end data store (I hear some people are experimenting using Oracle as the back-end).
My team has just gone release with a large project that involves multiple SQL Express databases syncing sub-sets of data from a central SQL Server database via WAN and Internet (slow dial-up connection in some cases) with great success.
MS SQL 2005 Standard Edition and above have excellent replication capabilities and tools. Take a look at:
http://msdn.microsoft.com/en-us/library/ms151198(SQL.90).aspx
It's pretty capable. You can even use SQL Server Express as a readonly subscriber.
There are a lot of different things which databases CALL replication. Not all of them actually involve replication, and those which do work in vastly different ways. Some databases support several different types.
MySQL supports asynchronous replication, which is very good for some things. However, there are weaknesses. Statement-based replication is not the same as what most (any?) other databases do, and doesn't always result in the expected behaviour. Row-based replication is only supported by a non production-ready version (but is more consistent with how other databases do it).
Each database has its own take on replication, some involve other tools plugging in.
A bit off-topic but you might want to check Maatkit for tools to help with MySQL replication.
All the main commercial databases have decent replication - but some are more decent than others. IBM Informix Dynamic Server (version 11 and later) is particularly good. It actually has two systems - one for high availability (HDR - high-availability data replication) and the other for distributing data (ER - enterprise replication). And the the Mach 11 features (RSS - remote standalone secondary, and SDS - shared disk secondary) are excellent too, doubly so in 11.50 where you can write to either the primary or secondary of an HDR pair.
(Full disclosure: I work on Informix softare.)
I haven't tried it myself, but you might also want to look into OpenBaseSQL, which seems to have some simple to use replication built-in.
Another way to go is to run in a virtualized environment. I thought the data in this blog article was interesting
http://chucksblog.typepad.com/chucks_blog/2008/09/enterprise-apps.html
It's from an EMC executive, so obviously, it's not independent, but the experiment should be reproducible
Here's the data specific for Oracle
http://oraclestorageguy.typepad.com/oraclestorageguy/2008/09/to-rac-or-not-to-rac-reprise.html
Edit: If you run virtualized, then there are ways to make anything replicate
http://chucksblog.typepad.com/chucks_blog/2008/05/vmwares-srm-cha.html