getting Exception "java.lang.RuntimeException: javax.transaction.HeuristicMixedException" - mysql

I am using mysql 5.7 database and Jboss 4.2.3 application server. I am using managed connection in our application and for JMS messaging we use XA transaction.
Our application support Oracle, MSSql Server and PostgreSQL database as well and we are using these databases with the same Jboss configuration and everything was working properly without any error.
But now we thought to use mysql5.7(latest) database as well with the same Jboss configuration.
Now my problem is :
when we do any transaction(two phase commit) then when transaction gets committed and after that JMS messages start sending, till now it is ok but just after that it throws exception "java.lang.RuntimeException: javax.transaction.HeuristicMixedException".
09:59:44,475 WARN [loggerI18N] [com.arjuna.ats.internal.jta.resources.arjunacore.preparefailed] [com.arjuna.ats.internal.jta.resources.arjunacore.preparefailed] XAResourceRecord.prepare - prepare failed with exception XAException.XAER_RMFAIL
09:59:44,476 WARN [arjLoggerI18N] [com.arjuna.ats.arjuna.coordinator.BasicAction_50] - Prepare phase of action a002866:c34a:565e7368:d7 received heuristic decision: TwoPhaseOutcome.HEURISTIC_HAZARD
09:59:44,477 WARN [arjLoggerI18N] [com.arjuna.ats.arjuna.coordinator.BasicAction_36] - BasicAction.End() - prepare phase of action-id a002866:c34a:565e7368:d7 failed.
09:59:44,480 WARN [arjLoggerI18N] [com.arjuna.ats.arjuna.coordinator.BasicAction_37] - Received heuristic: TwoPhaseOutcome.HEURISTIC_HAZARD .
09:59:44,483 WARN [arjLoggerI18N] [com.arjuna.ats.arjuna.coordinator.BasicAction_38] - Action Aborting
09:59:44,557 ERROR [SOAPFaultHelperJAXWS] SOAP request exception
java.lang.RuntimeException: javax.transaction.HeuristicMixedException
at org.jboss.aspects.tx.TxPolicy.handleEndTransactionException(TxPolicy.java:198)
at org.jboss.aspects.tx.TxPolicy.endTransaction(TxPolicy.java:184)
at org.jboss.aspects.tx.TxPolicy.invokeInOurTx(TxPolicy.java:87)
at org.jboss.aspects.tx.TxInterceptor$Required.invoke(TxInterceptor.java:191)
at org.jboss.aop.joinpoint.MethodInvocation.invokeNext(MethodInvocation.java:101)
at org.jboss.aspects.tx.TxPropagationInterceptor.invoke(TxPropagationInterceptor.java:95)
at org.jboss.aop.joinpoint.MethodInvocation.invokeNext(MethodInvocation.java:101)
at org.jboss.ejb3.stateless.StatelessInstanceInterceptor.invoke(StatelessInstanceInterceptor.java:62)
at org.jboss.aop.joinpoint.MethodInvocation.invokeNext(MethodInvocation.java:101)
at org.jboss.aspects.security.AuthenticationInterceptor.invoke(AuthenticationInterceptor.java:77)
at org.jboss.ejb3.security.Ejb3AuthenticationInterceptor.invoke(Ejb3AuthenticationInterceptor.java:110)
at org.jboss.aop.joinpoint.MethodInvocation.invokeNext(MethodInvocation.java:101)
at org.jboss.ejb3.ENCPropagationInterceptor.invoke(ENCPropagationInterceptor.java:46)
at org.jboss.aop.joinpoint.MethodInvocation.invokeNext(MethodInvocation.java:101)
at org.jboss.ejb3.asynchronous.AsynchronousInterceptor.invoke(AsynchronousInterceptor.java:106)
at org.jboss.aop.joinpoint.MethodInvocation.invokeNext(MethodInvocation.java:101)
at org.jboss.wsf.container.jboss42.InvocationHandlerEJB3.invoke(InvocationHandlerEJB3.java:103)
at org.jboss.ws.core.server.ServiceEndpointInvoker.invoke(ServiceEndpointInvoker.java:221)
at org.jboss.wsf.stack.jbws.RequestHandlerImpl.processRequest(RequestHandlerImpl.java:466)
at org.jboss.wsf.stack.jbws.RequestHandlerImpl.handleRequest(RequestHandlerImpl.java:284)
at org.jboss.wsf.stack.jbws.RequestHandlerImpl.doPost(RequestHandlerImpl.java:201)
at org.jboss.wsf.stack.jbws.RequestHandlerImpl.handleHttpRequest(RequestHandlerImpl.java:134)
at org.jboss.wsf.stack.jbws.EndpointServlet.service(EndpointServlet.java:84)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at org.jboss.web.tomcat.filters.ReplyHeaderFilter.doFilter(ReplyHeaderFilter.java:96)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:230)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:175)
at org.jboss.web.tomcat.security.SecurityAssociationValve.invoke(SecurityAssociationValve.java:182)
at org.jboss.web.tomcat.security.JaccContextValve.invoke(JaccContextValve.java:84)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at org.jboss.web.tomcat.service.jca.CachedConnectionValve.invoke(CachedConnectionValve.java:157)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:262)
at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:844)
at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:583)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:446)
at java.lang.Thread.run(Thread.java:662)
Caused by: javax.transaction.HeuristicMixedException
at com.arjuna.ats.internal.jta.transaction.arjunacore.TransactionImple.commitAndDisassociate(TransactionImple.java:1397)
at com.arjuna.ats.internal.jta.transaction.arjunacore.BaseTransaction.commit(BaseTransaction.java:135)
at com.arjuna.ats.jbossatx.BaseTransactionManagerDelegate.commit(BaseTransactionManagerDelegate.java:87)
at org.jboss.aspects.tx.TxPolicy.endTransaction(TxPolicy.java:175)
... 40 more
Because of that we are not able to proceed further.
I am trying to fix it from previous some of the days.Also I researched so many links, websites, blogs but doesn't work for me. I tried everything but not able to fix the problem.
It is something that is causing the problem from the XA Transaction but not able to identify the exact reason why it is ?
I have only replaced the previous database to mysql5.7. With other databases it is working fine.
please help me out to find out the exact cause of this exception and solution as well. Thank you so much in advance

Related

Constant error in Tomcat logs for MySQL NoClassDefFoundError: com/mysql/cj/protocol/ExportControlled

I have a spring boot API which has both a MySQL and a Mongo DB. Now when running locally everything works well...no errors in the logs.
Now the second I deploy this to Tomcat in my production environment (Debian 10) I constantly see the below in the logs.
Now just to say, that the Spring -> MySQL inserts and queries work fine no issues. Its just this error constantly filling up the logs...really stumped on this one!
Thanks for taking the time!
Exception in thread "HikariPool-5 connection closer" java.lang.NoClassDefFoundError: com/mysql/cj/protocol/ExportControlled
at com.mysql.cj.protocol.NetworkResources.forceClose(NetworkResources.java:53)
at com.mysql.cj.protocol.AbstractSocketConnection.forceClose(AbstractSocketConnection.java:103)
at com.mysql.cj.protocol.a.NativeProtocol.quit(NativeProtocol.java:1227)
at com.mysql.cj.NativeSession.quit(NativeSession.java:174)
at com.mysql.cj.jdbc.ConnectionImpl.realClose(ConnectionImpl.java:1733)
at com.mysql.cj.jdbc.ConnectionImpl.close(ConnectionImpl.java:721)
at com.zaxxer.hikari.pool.PoolBase.quietlyCloseConnection(PoolBase.java:143)
at com.zaxxer.hikari.pool.HikariPool.lambda$closeConnection$1(HikariPool.java:451)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1130)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:630)
at java.base/java.lang.Thread.run(Thread.java:832)
Exception in thread "HikariPool-5 connection closer" java.lang.NoClassDefFoundError: com/mysql/cj/protocol/ExportControlled
at com.mysql.cj.protocol.NetworkResources.forceClose(NetworkResources.java:53)
at com.mysql.cj.protocol.AbstractSocketConnection.forceClose(AbstractSocketConnection.java:103)
at com.mysql.cj.protocol.a.NativeProtocol.quit(NativeProtocol.java:1227)
at com.mysql.cj.NativeSession.quit(NativeSession.java:174)
at com.mysql.cj.jdbc.ConnectionImpl.realClose(ConnectionImpl.java:1733)
at com.mysql.cj.jdbc.ConnectionImpl.close(ConnectionImpl.java:721)
at com.zaxxer.hikari.pool.PoolBase.quietlyCloseConnection(PoolBase.java:143)
at com.zaxxer.hikari.pool.HikariPool.lambda$closeConnection$1(HikariPool.java:451)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1130)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:630)
at java.base/java.lang.Thread.run(Thread.java:832)

Catching MySQL Deadlocks in a MDB (ActiveMQ) in JBoss 5.1

We are using JBoss 5.1 w/ MDB backed by ActiveMQ RAR.
When a message on a queue is consumed and performs some database operations which then result in a deadlock, the deadlock is essentially hosing the entire instance of JBoss until it is restarted. By hosed, any subsequent messages consumed on that queue all fail with the follow exception:
Caused by: javax.persistence.PersistenceException: org.hibernate.exception.GenericJDBCException: Cannot open connection
The deadlock exception never references my code, which in turn make it very difficult for me to catch and handle.
For example, here is an exception of a deadlock exception:
2012-06-18 18:52:19,848 WARN [JDBCExceptionReporter] : SQL Error: 1213, SQLState: 40001
2012-06-18 18:52:19,848 ERROR [JDBCExceptionReporter] : Deadlock found when trying to get lock; try restarting transaction
2012-06-18 18:52:19,850 ERROR [AbstractFlushingEventListener] : Could not synchronize database state with session
org.hibernate.exception.LockAcquisitionException: Could not execute JDBC batch update
at org.hibernate.exception.SQLStateConverter.convert(SQLStateConverter.java:105)
at org.hibernate.exception.JDBCExceptionHelper.convert(JDBCExceptionHelper.java:66)
at org.hibernate.jdbc.AbstractBatcher.executeBatch(AbstractBatcher.java:275)
at org.hibernate.engine.ActionQueue.executeActions(ActionQueue.java:266)
at org.hibernate.engine.ActionQueue.executeActions(ActionQueue.java:168)
at org.hibernate.event.def.AbstractFlushingEventListener.performExecutions(AbstractFlushingEventListener.java:321)
at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50)
at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1027)
at org.hibernate.impl.SessionImpl.managedFlush(SessionImpl.java:365)
at org.hibernate.ejb.AbstractEntityManagerImpl$1.beforeCompletion(AbstractEntityManagerImpl.java:504)
at com.arjuna.ats.internal.jta.resources.arjunacore.SynchronizationImple.beforeCompletion(SynchronizationImple.java:101)
at com.arjuna.ats.arjuna.coordinator.TwoPhaseCoordinator.beforeCompletion(TwoPhaseCoordinator.java:269)
at com.arjuna.ats.arjuna.coordinator.TwoPhaseCoordinator.end(TwoPhaseCoordinator.java:89)
at com.arjuna.ats.arjuna.AtomicAction.commit(AtomicAction.java:177)
at com.arjuna.ats.internal.jta.transaction.arjunacore.TransactionImple.commitAndDisassociate(TransactionImple.java:1423)
at com.arjuna.ats.internal.jta.transaction.arjunacore.BaseTransaction.commit(BaseTransaction.java:137)
at com.arjuna.ats.jbossatx.BaseTransactionManagerDelegate.commit(BaseTransactionManagerDelegate.java:75)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.endTransaction(MessageInflowLocalProxy.java:435)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.finish(MessageInflowLocalProxy.java:314)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.after(MessageInflowLocalProxy.java:230)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.invoke(MessageInflowLocalProxy.java:136)
at $Proxy677.afterDelivery(Unknown Source)
at org.apache.activemq.ra.MessageEndpointProxy$MessageEndpointAlive.afterDelivery(MessageEndpointProxy.java:128)
at org.apache.activemq.ra.MessageEndpointProxy.afterDelivery(MessageEndpointProxy.java:69)
at org.apache.activemq.ra.ServerSessionImpl.afterDelivery(ServerSessionImpl.java:224)
at org.apache.activemq.ActiveMQSession.run(ActiveMQSession.java:897)
at org.apache.activemq.ra.ServerSessionImpl.run(ServerSessionImpl.java:169)
at org.jboss.resource.work.WorkWrapper.execute(WorkWrapper.java:205)
at org.jboss.util.threadpool.BasicTaskWrapper.run(BasicTaskWrapper.java:260)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
Caused by: java.sql.BatchUpdateException: Deadlock found when trying to get lock; try restarting transaction
at com.mysql.jdbc.PreparedStatement.executeBatchSerially(PreparedStatement.java:2013)
at com.mysql.jdbc.PreparedStatement.executeBatch(PreparedStatement.java:1449)
at com.mysql.jdbc.jdbc2.optional.StatementWrapper.executeBatch(StatementWrapper.java:721)
at org.jboss.resource.adapter.jdbc.WrappedStatement.executeBatch(WrappedStatement.java:774)
at org.hibernate.jdbc.BatchingBatcher.doExecuteBatch(BatchingBatcher.java:70)
at org.hibernate.jdbc.AbstractBatcher.executeBatch(AbstractBatcher.java:268)
... 29 more
Caused by: com.mysql.jdbc.exceptions.jdbc4.MySQLTransactionRollbackException: Deadlock found when trying to get lock; try restarting transaction
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
at com.mysql.jdbc.Util.handleNewInstance(Util.java:407)
at com.mysql.jdbc.Util.getInstance(Util.java:382)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1064)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3603)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3535)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1989)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2150)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2626)
at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:2119)
at com.mysql.jdbc.PreparedStatement.executeUpdate(PreparedStatement.java:2415)
at com.mysql.jdbc.PreparedStatement.executeBatchSerially(PreparedStatement.java:1976)
... 34 more
2012-06-18 18:52:19,851 WARN [arjLoggerI18N] : [com.arjuna.ats.arjuna.coordinator.TwoPhaseCoordinator_2] TwoPhaseCoordinator.beforeCompletion - failed for com.arjuna.ats.internal.jta.resources.arjunacore.SynchronizationImple#480671ab
javax.persistence.PersistenceException: org.hibernate.exception.LockAcquisitionException: Could not execute JDBC batch update
at org.hibernate.ejb.AbstractEntityManagerImpl.throwPersistenceException(AbstractEntityManagerImpl.java:614)
at org.hibernate.ejb.AbstractEntityManagerImpl$1.beforeCompletion(AbstractEntityManagerImpl.java:513)
at com.arjuna.ats.internal.jta.resources.arjunacore.SynchronizationImple.beforeCompletion(SynchronizationImple.java:101)
at com.arjuna.ats.arjuna.coordinator.TwoPhaseCoordinator.beforeCompletion(TwoPhaseCoordinator.java:269)
at com.arjuna.ats.arjuna.coordinator.TwoPhaseCoordinator.end(TwoPhaseCoordinator.java:89)
at com.arjuna.ats.arjuna.AtomicAction.commit(AtomicAction.java:177)
at com.arjuna.ats.internal.jta.transaction.arjunacore.TransactionImple.commitAndDisassociate(TransactionImple.java:1423)
at com.arjuna.ats.internal.jta.transaction.arjunacore.BaseTransaction.commit(BaseTransaction.java:137)
at com.arjuna.ats.jbossatx.BaseTransactionManagerDelegate.commit(BaseTransactionManagerDelegate.java:75)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.endTransaction(MessageInflowLocalProxy.java:435)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.finish(MessageInflowLocalProxy.java:314)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.after(MessageInflowLocalProxy.java:230)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.invoke(MessageInflowLocalProxy.java:136)
at $Proxy677.afterDelivery(Unknown Source)
at org.apache.activemq.ra.MessageEndpointProxy$MessageEndpointAlive.afterDelivery(MessageEndpointProxy.java:128)
at org.apache.activemq.ra.MessageEndpointProxy.afterDelivery(MessageEndpointProxy.java:69)
at org.apache.activemq.ra.ServerSessionImpl.afterDelivery(ServerSessionImpl.java:224)
at org.apache.activemq.ActiveMQSession.run(ActiveMQSession.java:897)
at org.apache.activemq.ra.ServerSessionImpl.run(ServerSessionImpl.java:169)
at org.jboss.resource.work.WorkWrapper.execute(WorkWrapper.java:205)
at org.jboss.util.threadpool.BasicTaskWrapper.run(BasicTaskWrapper.java:260)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
Caused by: org.hibernate.exception.LockAcquisitionException: Could not execute JDBC batch update
at org.hibernate.exception.SQLStateConverter.convert(SQLStateConverter.java:105)
at org.hibernate.exception.JDBCExceptionHelper.convert(JDBCExceptionHelper.java:66)
at org.hibernate.jdbc.AbstractBatcher.executeBatch(AbstractBatcher.java:275)
at org.hibernate.engine.ActionQueue.executeActions(ActionQueue.java:266)
at org.hibernate.engine.ActionQueue.executeActions(ActionQueue.java:168)
at org.hibernate.event.def.AbstractFlushingEventListener.performExecutions(AbstractFlushingEventListener.java:321)
at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50)
at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1027)
at org.hibernate.impl.SessionImpl.managedFlush(SessionImpl.java:365)
at org.hibernate.ejb.AbstractEntityManagerImpl$1.beforeCompletion(AbstractEntityManagerImpl.java:504)
... 22 more
Caused by: java.sql.BatchUpdateException: Deadlock found when trying to get lock; try restarting transaction
at com.mysql.jdbc.PreparedStatement.executeBatchSerially(PreparedStatement.java:2013)
at com.mysql.jdbc.PreparedStatement.executeBatch(PreparedStatement.java:1449)
at com.mysql.jdbc.jdbc2.optional.StatementWrapper.executeBatch(StatementWrapper.java:721)
at org.jboss.resource.adapter.jdbc.WrappedStatement.executeBatch(WrappedStatement.java:774)
at org.hibernate.jdbc.BatchingBatcher.doExecuteBatch(BatchingBatcher.java:70)
at org.hibernate.jdbc.AbstractBatcher.executeBatch(AbstractBatcher.java:268)
... 29 more
Caused by: com.mysql.jdbc.exceptions.jdbc4.MySQLTransactionRollbackException: Deadlock found when trying to get lock; try restarting transaction
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
at com.mysql.jdbc.Util.handleNewInstance(Util.java:407)
at com.mysql.jdbc.Util.getInstance(Util.java:382)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1064)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3603)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3535)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1989)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2150)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2626)
at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:2119)
at com.mysql.jdbc.PreparedStatement.executeUpdate(PreparedStatement.java:2415)
at com.mysql.jdbc.PreparedStatement.executeBatchSerially(PreparedStatement.java:1976)
... 34 more
2012-06-18 18:52:19,912 WARN [TxConnectionManager] : Connection error occured: org.jboss.resource.connectionmanager.TxConnectionManager$TxConnectionEventListener#6acc2da9[state=NORMAL mc=org.jboss.resource.adapter.jdbc.xa.XAManagedConnection#2c9e906 handles=0 lastUse=1340059939649 permit=true trackByTx=true mcp=org.jboss.resource.connectionmanager.JBossManagedConnectionPool$OnePool#10015060 context=org.jboss.resource.connectionmanager.InternalManagedConnectionPool#4643d6d5 xaResource=org.jboss.resource.adapter.jdbc.xa.XAManagedConnection#2c9e906 txSync=null]
com.mysql.jdbc.jdbc2.optional.MysqlXAException: XA_RBDEADLOCK: Transaction branch was rolled back: deadlock was detected
at com.mysql.jdbc.jdbc2.optional.MysqlXAConnection.mapXAExceptionFromSQLException(MysqlXAConnection.java:605)
at com.mysql.jdbc.jdbc2.optional.MysqlXAConnection.dispatchCommand(MysqlXAConnection.java:584)
at com.mysql.jdbc.jdbc2.optional.MysqlXAConnection.end(MysqlXAConnection.java:479)
at org.jboss.resource.adapter.jdbc.xa.XAManagedConnection.end(XAManagedConnection.java:246)
at com.arjuna.ats.internal.jta.resources.arjunacore.XAResourceRecord.topLevelAbort(XAResourceRecord.java:396)
at com.arjuna.ats.arjuna.coordinator.BasicAction.doAbort(BasicAction.java:3270)
at com.arjuna.ats.arjuna.coordinator.BasicAction.doAbort(BasicAction.java:3248)
at com.arjuna.ats.arjuna.coordinator.BasicAction.Abort(BasicAction.java:1933)
at com.arjuna.ats.arjuna.coordinator.TwoPhaseCoordinator.end(TwoPhaseCoordinator.java:97)
at com.arjuna.ats.arjuna.AtomicAction.commit(AtomicAction.java:177)
at com.arjuna.ats.internal.jta.transaction.arjunacore.TransactionImple.commitAndDisassociate(TransactionImple.java:1423)
at com.arjuna.ats.internal.jta.transaction.arjunacore.BaseTransaction.commit(BaseTransaction.java:137)
at com.arjuna.ats.jbossatx.BaseTransactionManagerDelegate.commit(BaseTransactionManagerDelegate.java:75)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.endTransaction(MessageInflowLocalProxy.java:435)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.finish(MessageInflowLocalProxy.java:314)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.after(MessageInflowLocalProxy.java:230)
at org.jboss.ejb3.mdb.inflow.MessageInflowLocalProxy.invoke(MessageInflowLocalProxy.java:136)
at $Proxy677.afterDelivery(Unknown Source)
at org.apache.activemq.ra.MessageEndpointProxy$MessageEndpointAlive.afterDelivery(MessageEndpointProxy.java:128)
at org.apache.activemq.ra.MessageEndpointProxy.afterDelivery(MessageEndpointProxy.java:69)
at org.apache.activemq.ra.ServerSessionImpl.afterDelivery(ServerSessionImpl.java:224)
at org.apache.activemq.ActiveMQSession.run(ActiveMQSession.java:897)
at org.apache.activemq.ra.ServerSessionImpl.run(ServerSessionImpl.java:169)
at org.jboss.resource.work.WorkWrapper.execute(WorkWrapper.java:205)
at org.jboss.util.threadpool.BasicTaskWrapper.run(BasicTaskWrapper.java:260)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
2012-06-18 18:52:19,914 INFO [ServerSessionImpl:153] : Endpoint failed to process message. Reason: Endpoint after delivery notification failure
I can catch the subsequent errors (the errors on subsequent messages to the queue):
Caused by: javax.persistence.PersistenceException: org.hibernate.exception.GenericJDBCException: Cannot open connection
But I'm not even sure what to do with it, maybe I can get a new EntityManager that isn't hosed, but I'm getting via Injection to begin with... The only way I know to fix this error is to restart.
I assume that the initial Deadlock is happening as part of ending the transaction in the Queue which is why it's not happening in my code, but does any idea of a way I can handle this gracefully?
Update:
All DataSources are MySQL XA
In transaction-jboss-beans.xml we have transactionTimeout set to 300
There is no way to handle container transaction exception gracefully.
It decides to rollback whatever the reason is and you have no control against it. A complex option to get notified about such exceptions and rollback events may be to write a JCA connector which enrolls fake resources into the distributed transaction manager for each MDB transaction.
I would recommend you to investigate what happens and fix the trouble from its source.
Here is a dead-lock scenario, it always involve multiple threads: if two pieces of code use the same entities but in different order, a first thread will lock resource A (a row, a table or a Java monitor) and wait for B when a second thread have already locked resource B and now waits for A.
So a distributed dead-lock is possible between Java monitors and Database resources and that case is complex to diagnose. The full system is stuck until the transaction timeouts at both ends, Java thread dumps and database sessions and locks must be scanned.
In your case, as MySQL detects the dead-lock itself, it means only database resources are involved.
To help, I guess you should reduce the number of SQL queries run in your batch update for one JMS message, one transaction. With concurrent messages consumed at the same time, working on transaction applying large number of rows, a deadlock situation is more likely to occur.
But it is strange that your JBoss server is stuck after rollback because of a DB-only dead-lock:
either you have exhausted the number of JDBC connections from the DataSource pool
or there is no more MySQL server-side connection available
or all message beans are in dead-lock situation too
the transaction timeout may be too high to get rollbacks in a reasonable time frame
So either you reduce MDB concurrency by down sizing the corresponding pool, either you reduce the number of updates per transaction - maybe even as small as one update per JMS message...
I was able to resolve this by isolating each transaction using the following method:
Annotate the MDB with:
#TransactionManagement(value = TransactionManagementType.BEAN)
Thus telling the MDB that the Bean itself will manage the transaction and not the container (outside of my code), next, inject the necessary resources:
#Resource
MessageDrivenContext mc;
UserTransaction tx;
To create and manage my own transactions
tx = mc.getUserTransaction();
tx.begin();
//Do work
tx.commit();
The above step can be repeated for each block of code.
Using very granular transactions I was able to trace where in my code the lock / race condition was happening. Once I solved that I was able to back out some of the more granular transaction management.

Glassfish Jdbc-connectioPool Issue

Hi I am getting the following exception frequently in glassfish can any one help me on this.
The log message is null.
The log message is null.
java.sql.SQLException: Error in allocating a connection. Cause: java.lang.IllegalStateException: Wrong XAState: 0
at com.sun.gjc.spi.base.DataSource.getConnection(DataSource.java:115)
at com.sify.beaserv.bean.PollBoxBean.getNode(PollBoxBean.java:754)
at com.sify.beaserv.bean.PollBoxBean.buildAlarm(PollBoxBean.java:317)
at com.sify.beaserv.bean.PollBoxBean.processNode(PollBoxBean.java:652)
at com.sify.beaserv.bean.PollBoxBean.onMessage(PollBoxBean.java:60)
at sun.reflect.GeneratedMethodAccessor185.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at com.sun.enterprise.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1011)
at com.sun.enterprise.security.SecurityUtil.invoke(SecurityUtil.java:175)
at com.sun.ejb.containers.BaseContainer.invokeTargetBeanMethod(BaseContainer.java:2929)
at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4020)
at com.sun.ejb.containers.MessageBeanContainer.deliverMessage(MessageBeanContainer.java:1111)
at com.sun.ejb.containers.MessageBeanListenerImpl.deliverMessage(MessageBeanListenerImpl.java:74)
at com.sun.enterprise.connectors.inflow.MessageEndpointInvocationHandler.invoke(MessageEndpointInvocationHandler.java:179)
at $Proxy76.onMessage(Unknown Source)
at com.sun.messaging.jms.ra.OnMessageRunner.run(OnMessageRunner.java:258)
at com.sun.enterprise.connectors.work.OneWork.doWork(OneWork.java:76)
at com.sun.corba.ee.impl.orbutil.threadpool.ThreadPoolImpl$WorkerThread.run(ThreadPoolImpl.java:555)
The exception message Wrong XAState: 0 suggests that you're trying to use an XA driver, which is correct for two-phase commit. Is that true? Do you know which JDBC driver and which database vendor you're using? Do you get this message right at start up, or is it after you've been running successfully for a while?

c3p0 - hibernate - mysql

hibernate 3.6.8 final
c3p0 jar that came with hibernate 3.6.8 package -> c3p0-0.9.1.jar
1
15
40
0
5
2
The app seems to be working fine, however I get massive log calls with the following stacktrace:
org.apache.catalina.loader.WebappClassLoader loadClass
INFO: Illegal access: this web application instance has been stopped already. Could not load com.mysql.jdbc.exceptions.jdbc4.MySQLNonTransientConnectionException. The eventual following stack trace is caused by an error thrown for debugging purposes as well as to attempt to terminate the thread which caused the illegal access, and has no functional impact.
java.lang.IllegalStateException
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1566)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1526)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:169)
at com.mysql.jdbc.Util.getInstance(Util.java:386)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1013)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:987)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:982)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:927)
at com.mysql.jdbc.ConnectionImpl.connectOneTryOnly(ConnectionImpl.java:2411)
at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2153)
at com.mysql.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:792)
at com.mysql.jdbc.JDBC4Connection.<init>(JDBC4Connection.java:47)
at sun.reflect.GeneratedConstructorAccessor38.newInstance(Unknown Source)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
at com.mysql.jdbc.Util.handleNewInstance(Util.java:411)
at com.mysql.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:381)
at com.mysql.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:305)
at com.mchange.v2.c3p0.DriverManagerDataSource.getConnection(DriverManagerDataSource.java:134)
at com.mchange.v2.c3p0.WrapperConnectionPoolDataSource.getPooledConnection(WrapperConnectionPoolDataSource.java:182)
at com.mchange.v2.c3p0.WrapperConnectionPoolDataSource.getPooledConnection(WrapperConnectionPoolDataSource.java:171)
at com.mchange.v2.c3p0.impl.C3P0PooledConnectionPool$1PooledConnectionResourcePoolManager.acquireResource(C3P0PooledConnectionPool.java:152)
at com.mchange.v2.resourcepool.BasicResourcePool.doAcquire(BasicResourcePool.java:1074)
at com.mchange.v2.resourcepool.BasicResourcePool.doAcquireAndDecrementPendingAcquiresWithinLockOnSuccess(BasicResourcePool.java:1061)
at com.mchange.v2.resourcepool.BasicResourcePool.access$800(BasicResourcePool.java:32)
at com.mchange.v2.resourcepool.BasicResourcePool$ScatteredAcquireTask.run(BasicResourcePool.java:1796)
at com.mchange.v2.async.ThreadPoolAsynchronousRunner$PoolThread.run(ThreadPoolAsynchronousRunner.java:620)
Any information on how to remove that INFO log would be very much helpful thanks!
UPDATE: Is this a critical error? Or can should I just ignore it?
After a search on the web regarding this issue, I found some similar issues reported by several people. All of them point to a common problem: Threads. Basically, if you start new threads in your application (either in your code or by using a third party tool like Quartz, you have to make sure that all of the threads are stopped appropriately when the application is undeployed from the server. Here are some quotes from the searches:
Mikolaj Rydzewski wrote:
It looks like after webapp's instance has been undeployed, background quartz thread wants to do something and then exception occurs.
Another (and better explanation) on jspwiki.org:
It is possible that this is caused by Tomcat unsuccessfully reloading the web application. The app is unloaded, but all threads don't get shut down properly. As a result, when the threads try to run, they get clobbered by the fact that Tomcat has shut down its classloader, and an error is logged.
So, in order to solve this issue you have to make sure all threads started by your application will be stopped at application undeployment (or redeployment, it's the same). You can do this by registering a ServletContextListener to your application server and stopping your threads inside contextDestroyed(ServletContextEvent) method.
If you are using log4j, change your logging settings to something like this (the word ERROR replace INFO) :
log4j.rootLogger=ERROR, file, stdout
log4j.logger.org.hibernate=ERROR
They are located in the the log4j.properties file in yr project.
OK I switched to boneCP, c3p0 does not really seem to work for java6!!!

What is causing a Hibernate SQL query exception?

Hi all and sorry in advance for this post but I've spent way too much time going around in circles so I'm hoping someone could shed a light on it here for me.
I updated a webapp on Tomcat and I'm getting the following error which didn't exist on the previous version. Though I am quite confident that the part of code I modifed isn't to blame as I have tested the app on two different dev servers.
The production server is configured thus: CentOS 5.4 virtual server with tomcat 5.5.23 running mysql 5.0.77.
The two dev servers are: Windows XP SP2 running tomcat 5.5.23 with mysql 5.1.49
Mac OSX 10.6.6 Running tomcat 6 with mysql 5.1.51
The application was developed using struts (1.1 as far as I can gather) with hibernate 3 as the peristence layer. It only fails on the production server for some reason I can't fathom. I'd like to draw your attention to the java.sql.SQLException near the bottom. After some long searching I found this but because it was posted years ago (about 1 year before development started on this app I'm sure Hibernate has evolved from that version. as I can't find a way of implementing his solution. I use Eclipse Helios as an IDE.
Thanks in advance for taking your time to read this, to all who manage to reply.
javax.servlet.ServletException: org.hibernate.exception.SQLGrammarException: could not execute query
at fr.company.action.login.LoginAction.execute(LoginAction.java:219)
at org.apache.struts.action.RequestProcessor.processActionPerform(RequestProcessor.java:484)
at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:274)
at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1482)
at org.apache.struts.action.ActionServlet.doPost(ActionServlet.java:525)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:710)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
at fr.company.util.EncodingFilter.doFilter(EncodingFilter.java:37)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:525)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:875)
at org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
at org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
at org.apache.tomcat.util.net.MasterSlaveWorkerThread.run(MasterSlaveWorkerThread.java:113)
at java.lang.Thread.run(Thread.java:636)
javax.servlet.ServletException: org.hibernate.exception.SQLGrammarException: could not execute query
at fr.company.action.login.LoginAction.execute(LoginAction.java:219)
at org.apache.struts.action.RequestProcessor.processActionPerform(RequestProcessor.java:484)
at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:274)
at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1482)
at org.apache.struts.action.ActionServlet.doPost(ActionServlet.java:525)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:710)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
at fr.company.util.EncodingFilter.doFilter(EncodingFilter.java:37)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:525)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:875)
at org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
at org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
at org.apache.tomcat.util.net.MasterSlaveWorkerThread.run(MasterSlaveWorkerThread.java:113)
at java.lang.Thread.run(Thread.java:636)
java.lang.Exception: org.hibernate.exception.SQLGrammarException: could not execute query
at fr.company.dao.GenericDAO.findOne(GenericDAO.java:204)
at fr.company.dao.UserDAO.findOneUser(UserDAO.java:146)
at fr.company.service.UserPeer.logUser(UserPeer.java:72)
at fr.company.action.login.LoginAction.execute(LoginAction.java:127)
at org.apache.struts.action.RequestProcessor.processActionPerform(RequestProcessor.java:484)
at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:274)
at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1482)
at org.apache.struts.action.ActionServlet.doPost(ActionServlet.java:525)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:710)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
at fr.company.util.EncodingFilter.doFilter(EncodingFilter.java:37)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:525)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:875)
at org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
at org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
at org.apache.tomcat.util.net.MasterSlaveWorkerThread.run(MasterSlaveWorkerThread.java:113)
at java.lang.Thread.run(Thread.java:636)
Caused by: org.hibernate.exception.SQLGrammarException: could not execute query
at org.hibernate.exception.SQLStateConverter.convert(SQLStateConverter.java:65)
at org.hibernate.exception.JDBCExceptionHelper.convert(JDBCExceptionHelper.java:43)
at org.hibernate.loader.Loader.doList(Loader.java:2153)
at org.hibernate.loader.Loader.listIgnoreQueryCache(Loader.java:2029)
at org.hibernate.loader.Loader.list(Loader.java:2024)
at org.hibernate.loader.hql.QueryLoader.list(QueryLoader.java:369)
at org.hibernate.hql.ast.QueryTranslatorImpl.list(QueryTranslatorImpl.java:300)
at org.hibernate.engine.query.HQLQueryPlan.performList(HQLQueryPlan.java:153)
at org.hibernate.impl.SessionImpl.list(SessionImpl.java:1128)
at org.hibernate.impl.QueryImpl.list(QueryImpl.java:79)
at org.hibernate.impl.AbstractQueryImpl.uniqueResult(AbstractQueryImpl.java:749)
at fr.company.dao.GenericDAO.findOne(GenericDAO.java:198)
... 26 more
Caused by: java.sql.SQLException: Unknown column 'user0_1_.poloSize' in 'field list'
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:2928)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1571)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:1666)
at com.mysql.jdbc.Connection.execSQL(Connection.java:2994)
at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:936)
at com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:1030)
at com.mchange.v2.c3p0.impl.NewProxyPreparedStatement.executeQuery(NewProxyPreparedStatement.java:76)
at org.hibernate.jdbc.AbstractBatcher.getResultSet(AbstractBatcher.java:139)
at org.hibernate.loader.Loader.getResultSet(Loader.java:1669)
at org.hibernate.loader.Loader.doQuery(Loader.java:662)
at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:224)
at org.hibernate.loader.Loader.doList(Loader.java:2150)
... 35 more
The core error message says:
Unknown column 'user0_1_.poloSize' in 'field list'
As you say
It only fails on the production server
could it be possible that the column indicated above is missing from your production DB (while present in the DB(s) used for dev/integration testing)?
Looks like the cause of your problem is here..:
Caused by: java.sql.SQLException: Unknown column 'user0_1_.poloSize' in 'field list'
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:2928)
something is with your HQL. try to add to hibernate.cfg.xml
<property name="show_sql">true</property>
and add SQL dump to post (and HQL)