Operation failed:
Couldn't find section [mysqld] in the config file /etc/mysql/my.cnf
It is with this error, what is it and how do I fix?
I followed the link : https://bugs.mysql.com/bug.php?id=50030
#
# The MySQL database server configuration file.
#
# You can copy this to one of:
# - "/etc/mysql/my.cnf" to set global options,
# - "~/.my.cnf" to set user-specific options.
#
# One can use all long options that the program supports.
# Run program with --help to get a list of available options and with
# --print-defaults to see which it would actually understand and use.
#
# For explanations see
# http://dev.mysql.com/doc/mysql/en/server-system-variables.html
#
# * IMPORTANT: Additional settings that can override those from this file!
# The files must end with '.cnf', otherwise they'll be ignored.
#
!includedir /etc/mysql/conf.d/
!includedir /etc/mysql/mysql.conf.d/
# The following options will be passed to all MySQL clients
[client]
#password = your_password
port = 3306
socket = /tmp/mysql.sock
# Here follows entries for some specific programs
# The MySQL server
[mysqld]
port = 3306
socket = /tmp/mysql.sock
skip-locking
key_buffer_size = 16K
max_allowed_packet = 1M
table_open_cache = 4
sort_buffer_size = 64K
read_buffer_size = 256K
read_rnd_buffer_size = 256K
net_buffer_length = 2K
thread_stack = 128K
# Don't listen on a TCP/IP port at all. This can be a security enhancement,
# if all processes that need to connect to mysqld run on the same host.
# All interaction with mysqld must be made via Unix sockets or named pipes.
# Note that using this option without enabling named pipes on Windows
# (using the "enable-named-pipe" option) will render mysqld useless!
#
#skip-networking
server-id = 1
# Uncomment the following if you want to log updates
#log-bin=mysql-bin
# binary logging format - mixed recommended
#binlog_format=mixed
# Uncomment the following if you are using InnoDB tables
#innodb_data_home_dir = /usr/local/mysql/data/
#innodb_data_file_path = ibdata1:10M:autoextend
#innodb_log_group_home_dir = /usr/local/mysql/data/
# You can set .._buffer_pool_size up to 50 - 80 %
# of RAM but beware of setting memory usage too high
#innodb_buffer_pool_size = 16M
#innodb_additional_mem_pool_size = 2M
# Set .._log_file_size to 25 % of buffer pool size
#innodb_log_file_size = 5M
#innodb_log_buffer_size = 8M
#innodb_flush_log_at_trx_commit = 1
#innodb_lock_wait_timeout = 50
[mysqldump]
quick
max_allowed_packet = 16M
[mysql]
no-auto-rehash
# Remove the next comment character if you are not familiar with SQL
#safe-updates
[myisamchk]
key_buffer_size = 8M
sort_buffer_size = 8M
[mysqlhotcopy]
interactive-timeout
It means MySQL Workbench is looking for a [mysqld] section in your my.cnf file. It's standard to have one, so I suggest adding one. My test shows Workbench will add this for you, so I'm not sure why it's not for you, but ultimately the solution is to add it.
Related
I have currently installed MySQL version 5.6 installed on my local system. I want to permanently set the group_concat_max_length system variable to some value.
When I do it using
set global group_concat_max_len = 100000;
command in the mysql terminal, the value is set but the value changes to default on restart.
I have also changed my.cnf file and put it under [mysqld] header.
Can anyone suggest what might be the problem?
Edit:
my.cnf
#
# The MySQL database server configuration file.
#
# You can copy this to one of:
# - "/etc/mysql/my.cnf" to set global options,
# - "~/.my.cnf" to set user-specific options.
#
# One can use all long options that the program supports.
# Run program with --help to get a list of available options and with
# --print-defaults to see which it would actually understand and use.
#
# For explanations see
# http://dev.mysql.com/doc/mysql/en/server-system-variables.html
# This will be passed to all mysql clients
# It has been reported that passwords should be enclosed with ticks/quotes
# escpecially if they contain "#" chars...
# Remember to edit /etc/mysql/debian.cnf when changing the socket location.
[client]
port = 3306
socket = /var/run/mysqld/mysqld.sock
# Here is entries for some specific programs
# The following values assume you have at least 32M ram
# This was formally known as [safe_mysqld]. Both versions are currently parsed.
[mysqld_safe]
socket = /var/run/mysqld/mysqld.sock
nice = 0
[mysqld]
#
# * Basic Settings
#
user = mysql
pid-file = /var/run/mysqld/mysqld.pid
socket = /var/run/mysqld/mysqld.sock
port = 3306
basedir = /usr
datadir = /var/lib/mysql
tmpdir = /tmp
lc-messages-dir = /usr/share/mysql
skip-external-locking
#
# Instead of skip-networking the default is now to listen only on
# localhost which is more compatible and is not less secure.
# bind-address = 127.0.0.1
#max_connections=200 (mysql connections)
#
# * Fine Tuning
#
key_buffer = 16M
max_allowed_packet = 16M
thread_stack = 192K
thread_cache_size = 8
# This replaces the startup script and checks MyISAM tables if needed
# the first time they are touched
myisam-recover = BACKUP
#max_connections = 100
#table_cache = 64
#thread_concurrency = 10
#
# * Query Cache Configuration
#
innodb_buffer_pool_size = 8G
innodb_flush_log_at_trx_commit = 2
query_cache_size=268435456
query_cache_type=1
query_cache_limit=8388608
group_concat_max_len=100000
#query_cache_limit = 1M
#query_cache_size = 16M
#
# * Logging and Replication
#
# Both location gets rotated by the cronjob.
# Be aware that this log type is a performance killer.
# As of 5.1 you can enable the log at runtime!
#general_log_file = /var/log/mysql/mysql.log
#general_log = 1
#
# Error log - should be very few entries.
#
log_error = /var/log/mysql/error.log
#
# Here you can see queries with especially long duration
#log_slow_queries = /var/log/mysql/mysql-slow.log
#long_query_time = 2
#log-queries-not-using-indexes
#
# The following can be used as easy to replay backup logs or for replication.
# note: if you are setting up a replication slave, see README.Debian about
# other settings you may need to change.
#server-id = 1
#log_bin = /var/log/mysql/mysql-bin.log
expire_logs_days = 10
max_binlog_size = 100M
#binlog_do_db = include_database_name
#binlog_ignore_db = include_database_name
#
# * InnoDB
#
# InnoDB is enabled by default with a 10MB datafile in /var/lib/mysql/.
# Read the manual for more InnoDB related options. There are many!
#
# * Security Features
#
# Read the manual, too, if you want chroot!
# chroot = /var/lib/mysql/
#
# For generating SSL certificates I recommend the OpenSSL GUI "tinyca".
#
# ssl-ca=/etc/mysql/cacert.pem
# ssl-cert=/etc/mysql/server-cert.pem
# ssl-key=/etc/mysql/server-key.pem
[mysqldump]
quick
quote-names
max_allowed_packet = 16M
[mysql]
#no-auto-rehash # faster start of mysql but no tab completition
[isamchk]
key_buffer = 16M
#
# * IMPORTANT: Additional settings that can override those from this file!
# The files must end with '.cnf', otherwise they'll be ignored.
#
!includedir /etc/mysql/conf.d/
mysql file in /etc/init.d/
...
SELF=$(cd $(dirname $0); pwd -P)/$(basename $0)
CONF=/etc/mysql/my.cnf
MYADMIN="/usr/bin/mysqladmin --defaults-file=/etc/mysql/debian.cnf"
# priority can be overriden and "-s" adds output to stderr
ERR_LOGGER="logger -p daemon.err -t /etc/init.d/mysql -i"
...
After mysql restart:
mysql> show variables like '%group_concat_max%';
+----------------------+-------+
| Variable_name | Value |
+----------------------+-------+
| group_concat_max_len | 1024 |
+----------------------+-------+
1 row in set (0.00 sec)
The single line from your configuration file NEEDS to be listed as 6 lines because initialization can only deal with one variable per line, imho.
You will likely find that your query cache size of about 268M and query_cache_limit of about 8M would be more effective at 50M and 1M respectively.
The reason being when one row is changed in a table, every cached query result for the updated table is marked invalid - i.e. cpu cycles are consumed to mark the cache results individually.
After restart, please confirm SHOW GLOBAL VARIABLES LIKE 'group_concat_max_length' has your intended value. It should be visible.
I am trying to upload a 10 MB CSV Excel file with over 100k entries, and I keep getting the "MySQL server has gone away" error in phpMyAdmin. I am using WAMP Server and I changed all the variables I could find the in my.ini file, but with no results. Neither after restarting the server.
I've changed:
max_allowed_packet = 1000M
innodb_log_file_size = 500M
innodb_log_buffer_size = 800M
innodb_lock_wait_timeout = 600
The whole my.ini file looks like this:
enter co# Example MySQL config file for medium systems.
#
# This is for a system with little memory (32M - 64M) where MySQL plays
# an important part, or systems up to 128M where MySQL is used together with
# other programs (such as a web server)
#
# You can copy this file to
# /etc/my.cnf to set global options,
# mysql-data-dir/my.cnf to set server-specific options (in this
# installation this directory is C:\mysql\data) or
# ~/.my.cnf to set user-specific options.
#
# In this file, you can use all long options that a program supports.
# If you want to know which options a program supports, run the program
# with the "--help" option.
# The following options will be passed to all MySQL clients
[client]
#password = your_password
port = 3306
socket = /tmp/mysql.sock
# Here follows entries for some specific programs
# The MySQL server
[wampmysqld]
port = 3306
socket = /tmp/mysql.sock
key_buffer_size = 16M
max_allowed_packet = 1000M
sort_buffer_size = 512K
net_buffer_length = 8K
read_buffer_size = 8M
read_rnd_buffer_size = 512K
myisam_sort_buffer_size = 8M
basedir=c:/wamp/bin/mysql/mysql5.6.17
log-error=c:/wamp/logs/mysql.log
datadir=c:/wamp/bin/mysql/mysql5.6.17/data
lc-messages-dir=c:/wamp/bin/mysql/mysql5.6.17/share
# Change your locale here !
lc-messages=fr_FR
# Avoid warning
explicit_defaults_for_timestamp = TRUE
# Don't listen on a TCP/IP port at all. This can be a security enhancement,
# if all processes that need to connect to mysqld run on the same host.
# All interaction with mysqld must be made via Unix sockets or named pipes.
# Note that using this option without enabling named pipes on Windows
# (via the "enable-named-pipe" option) will render mysqld useless!
#
#skip-networking
# Disable Federated by default
skip-federated
# Replication Master Server (default)
# binary logging is required for replication
log-bin=mysql-bin
# binary logging format - mixed recommended
binlog_format=mixed
# required unique id between 1 and 2^32 - 1
# defaults to 1 if master-host is not set
# but will not function as a master if omitted
server-id = 1
# Replication Slave (comment out master section to use this)
# New for MySQL 5.6 if no slave
skip-slave-start
#
# To configure this host as a replication slave, you can choose between
# two methods :
#
# 1) Use the CHANGE MASTER TO command (fully described in our manual) -
# the syntax is:
#
# CHANGE MASTER TO MASTER_HOST=<host>, MASTER_PORT=<port>,
# MASTER_USER=<user>, MASTER_PASSWORD=<password> ;
#
# where you replace <host>, <user>, <password> by quoted strings and
# <port> by the master's port number (3306 by default).
#
# Example:
#
# CHANGE MASTER TO MASTER_HOST='125.564.12.1', MASTER_PORT=3306,
# MASTER_USER='joe', MASTER_PASSWORD='secret';
#
# OR
#
# 2) Set the variables below. However, in case you choose this method, then
# start replication for the first time (even unsuccessfully, for example
# if you mistyped the password in master-password and the slave fails to
# connect), the slave will create a master.info file, and any later
# change in this file to the variables' values below will be ignored and
# overridden by the content of the master.info file, unless you shutdown
# the slave server, delete master.info and restart the slaver server.
# For that reason, you may want to leave the lines below untouched
# (commented) and instead use CHANGE MASTER TO (see above)
#
# required unique id between 2 and 2^32 - 1
# (and different from the master)
# defaults to 2 if master-host is set
# but will not function as a slave if omitted
#server-id = 2
#
# The replication master for this slave - required
#master-host = <hostname>
#
# The username the slave will use for authentication when connecting
# to the master - required
#master-user = <username>
#
# The password the slave will authenticate with when connecting to
# the master - required
#master-password = <password>
#
# The port the master is listening on.
# optional - defaults to 3306
#master-port = <port>
#
# binary logging - not required for slaves, but recommended
#log-bin=mysql-bin
# Point the following paths to different dedicated disks
#tmpdir = /tmp/
#log-update = /path-to-dedicated-directory/hostname
# Uncomment the following if you are using InnoDB tables
#innodb_data_home_dir = C:\mysql\data/
#innodb_data_file_path = ibdata1:10M:autoextend
#innodb_log_group_home_dir = C:\mysql\data/
#innodb_log_arch_dir = C:\mysql\data/
# You can set .._buffer_pool_size up to 50 - 80 %
# of RAM but beware of setting memory usage too high
innodb_buffer_pool_size = 511M
#innodb_additional_mem_pool_size = 2M
# Set .._log_file_size to 25 % of buffer pool size
innodb_log_file_size = 500M
innodb_log_buffer_size = 800M
#innodb_flush_log_at_trx_commit = 1
innodb_lock_wait_timeout = 600
[mysqldump]
quick
max_allowed_packet = 1000M
[mysql]
no-auto-rehash
# Remove the next comment character if you are not familiar with SQL
#safe-updates
[isamchk]
key_buffer = 20M
sort_buffer_size = 20M
read_buffer = 2M
write_buffer = 2M
[myisamchk]
key_buffer = 20M
sort_buffer_size = 20M
read_buffer = 2M
write_buffer = 2M
[mysqlhotcopy]
interactive-timeout
[mysqld]
port=3306
explicit_defaults_for_timestamp = TRUE
Try increasing the setting for wait_timeout
If that doesn't work, try increasing for interactive_timeout.
Also, increasing the lock times on innodb is at the query level; this means how long a query will wait to acquire a lock if another query has the lock. This will then cause an to be thrown back to the client similar to the effect of 1205 Lock wait timeout exceeded.
I have been trying to optimize my AWS server for apache and mysql to use the whole lot of resources allocated to it i.e: CPU: 8 core, RAM: 30GiB
Top command screenshot
whatevere I do, I am not able to get the config work optimistically.
Here is the my.cnf file content
#
# The MySQL database server configuration file.
#
# You can copy this to one of:
# - "/etc/mysql/my.cnf" to set global options,
# - "~/.my.cnf" to set user-specific options.
#
# One can use all long options that the program supports.
# Run program with --help to get a list of available options and with
# --print-defaults to see which it would actually understand and use.
#
# For explanations see
# http://dev.mysql.com/doc/mysql/en/server-system-variables.html
# This will be passed to all mysql clients
# It has been reported that passwords should be enclosed with ticks/quotes
# escpecially if they contain "#" chars...
# Remember to edit /etc/mysql/debian.cnf when changing the socket location.
[client]
port = 3306
socket = /var/run/mysqld/mysqld.sock
# Here is entries for some specific programs
# The following values assume you have at least 32M ram
# This was formally known as [safe_mysqld]. Both versions are currently parsed.
[mysqld_safe]
socket = /var/run/mysqld/mysqld.sock
nice = 0
[mysqld]
#
# * Basic Settings
#
user = mysql
pid-file = /var/run/mysqld/mysqld.pid
socket = /var/run/mysqld/mysqld.sock
port = 3306
basedir = /usr
datadir = /var/lib/mysql
tmpdir = /tmp
lc-messages-dir = /usr/share/mysql
skip-external-locking
#
# Instead of skip-networking the default is now to listen only on
# localhost which is more compatible and is not less secure.
#bind-address = 127.0.0.1
#skip-networking
#
# * Fine Tuning
#
key_buffer = 512M
max_allowed_packet = 16M
thread_stack = 192K
thread_cache_size = 8
# This replaces the startup script and checks MyISAM tables if needed
# the first time they are touched
myisam-recover = BACKUP
max_connections = 505
max_user_connections = 500
table_cache = 8192
#thread_concurrency = 10
#
# * Query Cache Configuration
#
query_cache_limit = 64M
query_cache_size = 64M
#
# * Logging and Replication
#
# Both location gets rotated by the cronjob.
# Be aware that this log type is a performance killer.
# As of 5.1 you can enable the log at runtime!
#general_log_file = /var/log/mysql/mysql.log
#general_log = 1
#
# Error log - should be very few entries.
#
log_error = /var/log/mysql/error.log
#
# Here you can see queries with especially long duration
#log_slow_queries = /var/log/mysql/mysql-slow.log
#long_query_time = 2
#log-queries-not-using-indexes
#
# The following can be used as easy to replay backup logs or for replication.
# note: if you are setting up a replication slave, see README.Debian about
# other settings you may need to change.
#server-id = 1
#log_bin = /var/log/mysql/mysql-bin.log
expire_logs_days = 10
max_binlog_size = 100M
#binlog_do_db = include_database_name
#binlog_ignore_db = include_database_name
#
# * InnoDB
#
# InnoDB is enabled by default with a 10MB datafile in /var/lib/mysql/.
# Read the manual for more InnoDB related options. There are many!
#
# * Security Features
#
# Read the manual, too, if you want chroot!
# chroot = /var/lib/mysql/
#
# For generating SSL certificates I recommend the OpenSSL GUI "tinyca".
#
# ssl-ca=/etc/mysql/cacert.pem
# ssl-cert=/etc/mysql/server-cert.pem
# ssl-key=/etc/mysql/server-key.pem
tmp_table_size = 1G
max_heap_table_size = 1G
innodb_buffer_pool_size = 4G
[mysqldump]
quick
quote-names
max_allowed_packet = 16M
[mysql]
#no-auto-rehash # faster start of mysql but no tab completition
[isamchk]
key_buffer = 256M
#
# * IMPORTANT: Additional settings that can override those from this file!
# The files must end with '.cnf', otherwise they'll be ignored.
#
!includedir /etc/mysql/conf.d/
I would really appriciate if I had any idea what else can be done so that both Mysql and Apache uses the allocated resources
Which engine, MyISAM or InnoDB? If InnoDB, decrease key_buffer_size to 40M. If MyISAM, convert.
Decrease MaxClients in Apache to 20.
The "top" shows a calm system. I interpret it to mean that there is not much to do, not that it is poorly utilizing resources.
If you have particular MySQL queries that are slow; let's see them. Often there are simple fixes.
Some Apache threads are moderately high on CPU -- look at the algorithms involved in the PHP (or whatever) code you have.
This question already has answers here:
ERROR 2006 (HY000): MySQL server has gone away
(24 answers)
Closed 5 years ago.
Environment : Windows 7
XAMPP 1.7.3
I have gone through Many stackoverflow solution for this problem and changed setting in file
my.ini
which now looks like
# Example MySQL config file for medium systems.
#
# This is for a system with little memory (32M - 64M) where MySQL plays
# an important part, or systems up to 128M where MySQL is used together with
# other programs (such as a web server)
#
# You can copy this file to
# /etc/my.cnf to set global options,
# mysql-data-dir/my.cnf to set server-specific options (in this
# installation this directory is #localstatedir#) or
# ~/.my.cnf to set user-specific options.
#
# In this file, you can use all long options that a program supports.
# If you want to know which options a program supports, run the program
# with the "--help" option.
# The following options will be passed to all MySQL clients
[client]
#user = your_username
#password = your_password
host = .
port = 3306
socket = "MySQL"
# Here follows entries for some specific programs
# The MySQL server
[mysqld]
basedir = "D:/Program Files/xampp/mysql/"
datadir = "D:/Program Files/xampp/mysql/data/"
port = 3306
socket = "MySQL"
skip-locking
key_buffer = 16M
max_allowed_packet = 254M
table_cache = 64
sort_buffer_size = 512K
net_buffer_length = 8K
read_buffer_size = 256K
read_rnd_buffer_size = 512K
myisam_sort_buffer_size = 8M
default-time-zone = "Asia/Calcutta"
log_error = "D:/Program Files/xampp/mysql/data/mysql.err"
pid_file = "mysql.pid"
general_log = 0
general_log_file = "D:/Program Files/xampp/mysql/data/mysql.log"
slow_query_log = 0
slow_query_log_file = "D:/Program Files/xampp/mysql/data/mysql-slow.log"
# Don't listen on a TCP/IP port at all. This can be a security enhancement,
# if all processes that need to connect to mysqld run on the same host.
# All interaction with mysqld must be made via Unix sockets or named pipes.
# Note that using this option without enabling named pipes on Windows
# (via the "enable-named-pipe" option) will render mysqld useless!
#
#skip-networking
enable-named-pipe
# Disable Federated by default
skip-federated
# Replication Master Server (default)
# binary logging is required for replication
#log-bin = mysql-bin
# binary logging format - mixed recommended
#binlog_format = mixed
# required unique id between 1 and 2^32 - 1
# defaults to 1 if master-host is not set
# but will not function as a master if omitted
server-id = 1
# Replication Slave (comment out master section to use this)
#
# To configure this host as a replication slave, you can choose between
# two methods :
#
# 1) Use the CHANGE MASTER TO command (fully described in our manual) -
# the syntax is:
#
# CHANGE MASTER TO MASTER_HOST=<host>, MASTER_PORT=<port>,
# MASTER_USER=<user>, MASTER_PASSWORD=<password> ;
#
# where you replace <host>, <user>, <password> by quoted strings and
# <port> by the master's port number (3306 by default).
#
# Example:
#
# CHANGE MASTER TO MASTER_HOST='125.564.12.1', MASTER_PORT=3306,
# MASTER_USER='joe', MASTER_PASSWORD='secret';
#
# OR
#
# 2) Set the variables below. However, in case you choose this method, then
# start replication for the first time (even unsuccessfully, for example
# if you mistyped the password in master-password and the slave fails to
# connect), the slave will create a master.info file, and any later
# change in this file to the variables' values below will be ignored and
# overridden by the content of the master.info file, unless you shutdown
# the slave server, delete master.info and restart the slaver server.
# For that reason, you may want to leave the lines below untouched
# (commented) and instead use CHANGE MASTER TO (see above)
#
# required unique id between 2 and 2^32 - 1
# (and different from the master)
# defaults to 2 if master-host is set
# but will not function as a slave if omitted
#server-id = 2
#
# The replication master for this slave - required
#master-host = <hostname>
#
# The username the slave will use for authentication when connecting
# to the master - required
#master-user = <username>
#
# The password the slave will authenticate with when connecting to
# the master - required
#master-password = <password>
#
# The port the master is listening on.
# optional - defaults to 3306
#master-port = <port>
#
# binary logging - not required for slaves, but recommended
#log-bin = mysql-bin
# Point the following paths to different dedicated disks
tmpdir = "D:/Program Files/xampp/tmp/"
#log-update = "D:/Program Files/xampp/tmp/mysql"
# Uncomment the following if you are using InnoDB tables
#skip-innodb
innodb_data_home_dir = "D:/Program Files/xampp/mysql/data/"
innodb_data_file_path = ibdata1:10M:autoextend
innodb_log_group_home_dir = "D:/Program Files/xampp/mysql/data/"
# You can set .._buffer_pool_size up to 50 - 80 %
# of RAM but beware of setting memory usage too high
innodb_buffer_pool_size = 16M
innodb_additional_mem_pool_size = 2M
# Set .._log_file_size to 25 % of buffer pool size
innodb_log_file_size = 5M
innodb_log_buffer_size = 8M
innodb_flush_log_at_trx_commit = 1
innodb_lock_wait_timeout = 50
[mysqldump]
quick
max_allowed_packet = 254M
[mysql]
no-auto-rehash
# Remove the next comment character if you are not familiar with SQL
#safe-updates
[isamchk]
key_buffer = 20M
sort_buffer_size = 20M
read_buffer = 2M
write_buffer = 2M
[myisamchk]
key_buffer = 20M
sort_buffer_size = 20M
read_buffer = 2M
write_buffer = 2M
[mysqlhotcopy]
interactive-timeout
but still i am getting same error. I am trying to restore mysqldump of size 160MB which has many BLOB contents .
Try changing the max_allowed_packet setting to a larger value in the server.
Open "my.ini/cnf", located in your MySQL installation folder, and under [mysqld] section change "max_allowed_packet = 64M" and don't forget to restart the server. You can check the value by executing:
SHOW VARIABLES LIKE 'max_allowed_packet';
Refer: http://dev.mysql.com/doc/refman/5.0/en/gone-away.html
Here is an explanation of how to solve that http://eppand.com/solution-to-mysql-error-2006-in-xampp/
If someone needs, there is untouched config files for XAMPP:
https://drive.google.com/folderview?id=0B8SVZZwmcOIYNjdwbkluUTJERTA&usp=sharing
I am still having trouble with my mysql server. It seems that since i optimize it, the tables were growing and now sometimes is very slow again. I have no idea of how to optimize more.
mySQL server has 48GB of RAM and mysqld is using about 8, most of the tables are innoDB.
Site has about 2000 users online. I also run explain on every query and every one of them is indexed.
mySQL processes:
http://www.pik.ba/mysqlStanje.php
my.cnf:
# The MySQL database server configuration file.
#
# You can copy this to one of:
# - "/etc/mysql/my.cnf" to set global options,
# - "~/.my.cnf" to set user-specific options.
#
# One can use all long options that the program supports.
# Run program with --help to get a list of available options and with
# --print-defaults to see which it would actually understand and use.
#
# For explanations see
# http://dev.mysql.com/doc/mysql/en/server-system-variables.html
# This will be passed to all mysql clients
# It has been reported that passwords should be enclosed with ticks/quotes
# escpecially if they contain "#" chars...
# Remember to edit /etc/mysql/debian.cnf when changing the socket location.
[client]
port = 3306
socket = /var/run/mysqld/mysqld.sock
# Here is entries for some specific programs
# The following values assume you have at least 32M ram
# This was formally known as [safe_mysqld]. Both versions are currently parsed.
[mysqld_safe]
socket = /var/run/mysqld/mysqld.sock
nice = 0
[mysqld]
#
# * Basic Settings
#
user = mysql
pid-file = /var/run/mysqld/mysqld.pid
socket = /var/run/mysqld/mysqld.sock
port = 3306
basedir = /usr
datadir = /var/lib/mysql
tmpdir = /tmp
language = /usr/share/mysql/english
skip-external-locking
#
# Instead of skip-networking the default is now to listen only on
# localhost which is more compatible and is not less secure.
bind-address = 10.100.27.30
#
# * Fine Tuning
#
key_buffer = 64M
key_buffer_size = 512M
max_allowed_packet = 16M
thread_stack = 128K
thread_cache_size = 8
# This replaces the startup script and checks MyISAM tables if needed
# the first time they are touched
myisam-recover = BACKUP
max_connections = 1000
table_cache = 1000
join_buffer_size = 2M
tmp_table_size = 2G
max_heap_table_size = 2G
innodb_buffer_pool_size = 3G
innodb_additional_mem_pool_size = 128M
innodb_log_file_size = 100M
log-slow-queries = /var/log/mysql/slow.log
sort_buffer_size = 5M
net_buffer_length = 5M
read_buffer_size = 2M
read_rnd_buffer_size = 12M
thread_concurrency = 10
ft_min_word_len = 3
#thread_concurrency = 10
#
# * Query Cache Configuration
#
query_cache_limit = 1M
query_cache_size = 512M
#
# * Logging and Replication
#
# Both location gets rotated by the cronjob.
# Be aware that this log type is a performance killer.
#log = /var/log/mysql/mysql.log
#
# Error logging goes to syslog. This is a Debian improvement :)
#
# Here you can see queries with especially long duration
#log_slow_queries = /var/log/mysql/mysql-slow.log
#long_query_time = 2
#log-queries-not-using-indexes
#
# The following can be used as easy to replay backup logs or for replication.
# note: if you are setting up a replication slave, see README.Debian about
# other settings you may need to change.
#server-id = 1
#log_bin = /var/log/mysql/mysql-bin.log
expire_logs_days = 10
max_binlog_size = 100M
#binlog_do_db = include_database_name
#binlog_ignore_db = include_database_name
#
# * BerkeleyDB
#
# Using BerkeleyDB is now discouraged as its support will cease in 5.1.12.
skip-bdb
#
# * InnoDB
#
# InnoDB is enabled by default with a 10MB datafile in /var/lib/mysql/.
# Read the manual for more InnoDB related options. There are many!
# You might want to disable InnoDB to shrink the mysqld process by circa 100MB.
#skip-innodb
#
# * Security Features
#
# Read the manual, too, if you want chroot!
# chroot = /var/lib/mysql/
#
# For generating SSL certificates I recommend the OpenSSL GUI "tinyca".
#
# ssl-ca=/etc/mysql/cacert.pem
# ssl-cert=/etc/mysql/server-cert.pem
# ssl-key=/etc/mysql/server-key.pem
[mysqldump]
quick
quote-names
max_allowed_packet = 16M
[mysql]
#no-auto-rehash # faster start of mysql but no tab completition
[isamchk]
key_buffer = 16M
#
# * NDB Cluster
#
# See /usr/share/doc/mysql-server-*/README.Debian for more information.
#
# The following configuration is read by the NDB Data Nodes (ndbd processes)
# not from the NDB Management Nodes (ndb_mgmd processes).
#
# [MYSQL_CLUSTER]
# ndb-connectstring=127.0.0.1
#
# * IMPORTANT: Additional settings that can override those from this file!
# The files must end with '.cnf', otherwise they'll be ignored.
#
!includedir /etc/mysql/conf.d/
I refreshed on your process list page a couple times and quite often the queries I saw included "SELECT tablename.*"
Do you need every column from that table? If not that could help.
Unless your server is strapped for resources I wouldn't worry a whole lot about sleeping processes. They typically don't consume a lot of resources. However if you really do wish to manually set the amount of time before they are killed you can do the following in your config file:
[mysqld]
wait_timeout=20