I am trying to set up a cross-compile environment on an AWS EC2 Ubuntu box targeting Nvida Xavier devices on Cuda 10.2. I tried following the "instructions" at https://docs.nvidia.com/cuda/archive/10.2/cuda-installation-guide-linux/index.html#cross-platform which say to install
sudo dpkg -i cuda-repo-cross-<identifier>_all.deb
but no clue as to where I might get hold of that .deb file, or what <identifier> should be replaced with. I have installed the native package cuda-repo-ubuntu1804-10-2-local-10.2.89-440.33.01_1.0-1_amd64.deb and there are a load of .deb files in /var/cuda-repo-10-2-local-10.2.89-440.33.01, but none of them are that one.
So it turns out that the instructions that can be found by googling for, for instance, "cuda install cross compile" are wrong, or at least so incomplete as makes no difference.
Instead, use the SDK manager https://developer.nvidia.com/nvidia-sdk-manager to install just the host tools. It does run without a GUI.
While trying to install Perl modules like JSON::XS or YAML::XS, i receive the same error:
XS.xs:1:10: fatal error: 'EXTERN.h' file not found
I use MacBook, xCode is up to date, everything else that could help is up to date too.
Since OS X El Capitan, Apple introduced System Integrity Protection which restricts writing to /usr/lib /usr/bin and other sensitive directories (even to root or sudo user) that are used by the installation of Perl bundled with the Operating System. This can cause issues when it comes to installing new modules and also if trying to install XS modules ( those linked to external C libraries ).
For this reason you should not consider the default Perl installation as a working development environment, especially if you are installing custom modules.
Check out this thread on PM and others. I had since El-Capitan managed to solve this before by manually building from tarball and adding a few params or environment variables to set the paths believing that it would be best to retain use of the system Perl but this is not the way to go. This makes your environment difficult to build but also brittle and sensitive to OS updates that may either break things in many different ways.
The best practice seems to be starting with a Perl using brew install perl and work in this environment, remembering to setup your bash_profile as directed by the installer.
Also worth remembering to do a brew link perl. If you receive warnings about this clobbering what looks like system Perl libraries don't worry - these are likely modules that were installed by you over the top and it will cause you less trouble to link over these. If you have concerns, make a note of which module installs will be cleared and re-install them once your environment is configured ( ie your module installer approach is configured using cpanm or sticking with the old perl -MCPAN -e shell etc)
This new Perl setup from brew eliminates the need to continuing running sudo which adds another layer of things that can go wrong as environment variables don't follow through and permission conflicts arise etc.
Finally to simplify package/module installation I suggest doing a brew install cpanminus. If you had previously already installed this, you can ensure the paths etc are configured by doing a brew reinstall cpanminus
If you want to take it another step further then you can install perlbrew as well which will give you the ability to run multiple versions of Perl as your user and configure these with their own libs and modules which can be very useful particularly if aligning with your production environment for testing etc.
One problem you may face if moving from system Perl to this kind of approach is needing to deal with any hangovers from installing things with sudo. It wis worth taking a little time to get all this set up right though and your issues going forward will be greatly reduced and you won't be left with that nagging feeling that you don't want to change anything for fear of it all breaking.
I have also come across a Perl Blog Article that suggests a fix for XS issues with perlbrew on Mojave
This Gist described updating your cpan shell install root though this shouldn't be necessary unless your cpan is stuck in an old config after taking steps above.
I've also raised this as a new issue on PerlMonks
After reading https://developer.apple.com/documentation/xcode_release_notes/xcode_10_release_notes#3035624 and installing the Additional headers via
sudo installer -pkg /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg -target /
I successfully compiled without the missing 'EXTERN.h' error
In order to follow the common advice I also tried with Perlbrew to install a dedicated development version of Perl. Especially with the advice in mind First, do not use the system Perl on MacOS. The installed version is for Apple, not for you (see the discussion here: https://www.perlmonks.org/?node_id=1224727).
Unfortunately, the following error occurred:
Test Summary Report
-------------------
porting/libperl.t (Wstat: 65280 Tests: 35 Failed: 0)
Non-zero exit status: 255
Parse errors: No plan found in TAP output
Files=2653, Tests=1217766, 708 wallclock secs (52.74 usr 9.40 sys + 395.38 cusr 49.90 csys = 507.42 CPU)
Result: FAIL
make: *** [test_harness] Error 1
##### Brew Failed #####
Therefore, I decided to install it the following way (and not following the advice due to the error).
Even after having the above mentioned macOS SDK headers already installed on Catalina (macOS 10.15.2) it didn't work for me. I faced the issue during the installation of the Perl module Mac-SystemDirectory-0.13. The following steps (by identifying the missing file in hope of having a more generic approach for more or less equivalent issues) did the trick:
Locate the header file (in this case EXTERN.h)
sudo find /Library -type f -name EXTERN.h
/Library/Developer/CommandLineTools/SDKs/MacOSX10.14.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE/EXTERN.h
/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/System/Library/Perl/5.28/darwin-thread-multi-2level/CORE/EXTERN.h
/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE/EXTERN.h
Ensure the installed Perl version (here 5.18) match the header file:
perl -v | grep version
This is perl 5, version 18, subversion 4 (v5.18.4) built for darwin-thread-multi-2level
Export the path for the C-Compiler (note MacOSX10.15.sdk for Catalina and Perl Version 5.18)
export CPATH=/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE
Invoke the Makefile.PL with perl
perl Makefile.PL
BTW — For anybody who's still struggling with this, my workaround was:
bash% module="Sub::Util" # For example
bash% cpanm --configure-args="INC=-I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE" "$module"
Please try this
CPATH=$(dirname $(find /usr/local/Cellar/ -name EXTERN.h)) cpan JSON::XS
For Big Sur and perl 5.30, EXTERN.h is at /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk/System/Library/Perl/5.30/darwin-thread-multi-2level/CORE
I'm trying to upgrade CPAN itself and got that error. But I have /usr/bin/cpan and I can't write there so I have to tweak it to write the updated version to /usr/local/bin/cpan.
No promises, but yum install perl-devel worked for me.
As #huyz has helpfully pointed out, if you hit this error on a Mac, you don't have this option, even though this is probably your issue, and you need to follow one of the above methods of getting a version of Perl that isn't missing important chunks, as per other answers.
But if, dear reader, you hit this error on a linux host, as I did, then this might be an option for you.
Building on what E Lisse suggested, you might also have luck looking in
/System/Volumes/Data/Library/Developer/CommandLineTools/SDKs/
For example:
CPATH=$(dirname $(find /System/Volumes/Data/Library/Developer/CommandLineTools/SDKs/ -name EXTERN.h)) cpan JSON::XS
You could also find where EXTERN.h is located and add that to your shell by default, e.g. in your .bashrc or .zshrc file:
export CPATH=/System/Volumes/Data/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE/
I really need someone's help here.
Early, I was playing around with homebrew, macport and active state TCL/TK after I got the new mac pro. But somehow I accidentally deleted the tcl/tclsh folder when I was trying to delete the active state version of tcl.
Now the problem is when I'm trying to install MongoDB with Macport using:
sudo port install mongodb
It give me an error says:
so I guess I delete the wrong file..is there any way I can get it back? I tried install tcl/tk using active state package but didn't work.
Help really needed...!
Thanks
The problem seems to be that you've deleted (at least part of) the system Tcl/Tk pre-installed by Apple.* MacPorts explicitly uses Apple's Tcl (or its own, if you ask it, but not ActiveState's or Homebrew's or any other). That's why it's looking for /usr/bin/tclsh rather than just whatever tclsh is on the PATH.
If you dig inside the Mountain Lion installer package, you may be able to find and run the Tcl/Tk installer manually, but Apple makes that different (and harder) with each release. The easier thing to do is just run the installer and let it repair things for you.
* It's also possible that you first replaced parts of Apple's Tcl with another version, which you shouldn't have done, and then broke that other version. But the solution is the same.
I use ActiveStates TCL version 8.6.0.0 for Windows x64.
In a script I call:
package require tcom
Tcom is included in the installation but I get the following error:
couldn't load libary "C:/TCL/lib/tcom/tcom.dll": Invalid argument while executing
"load C:/TCL/lib/tcom/tcom.dll"
("package ifneeded tcom 3.9" script)
invoked from within
"package require tcom"
Does anyone understand whats actually missing? C:/TCL/lib/tcom/tcom.dll is installed on my system, so what is the "invalid argument" ?
This appears to be a 32-bit/64-bit issue. You can't mix different bit-sizes within the same process† and you may well have installed a 64-bit build of ActiveTcl 8.6.0.0 under the belief that matching the size of the build and the system architecture is a good idea. Alas, this is not the case. ActiveTcl 8.6.0.0 for 64-bit Windows, for commercial reasons‡, requires an extra product key to access their 64-bit builds of external packages. But you've got the package installed anyway (perhaps from a previous installation of ActiveTcl?) and that appears to be a 32-bit build.
The misleading error from using the wrong size of binary library build is unfortunate (a relatively minor bug stemming from the subtle differences between Windows and POSIX and how Tcl handles the mapping between the two) but I'd bet that's it.
The easiest fix is to:
Uninstall all copies of ActiveTcl that you've got installed, then
Ensure that your C:\Tcl directory really is deleted, and then
Install the 32-bit build of ActiveTcl 8.6.0.0 (which works just fine on Win64-based systems like 64-bit Windows 7 and Windows 8). Once you've done that, you
Use teacup update to get a full set of packages installed and you should get Tcom working.
†Except on ARM with extra trickiness, which doesn't apply here.
‡I'm not going to try to justify them; it's their decision, not mine.
I have a solaris machine configuration: SunOS indevel07 5.10 Generic_147440-15 sun4v sparc sun4v. I am trying to install expect utility on this. expect utility requires tcl to be installed. I have tried to install that too, but i am getting errors. I have downloaded the tcl-8.5.12-sol10-sparc-local.gz and expect-5.45-sol10-sparc-local.gz from sunfreeware. I have unzipped them and tried to install them like pkgadd -d pkgname. I am getting errors like:
ERROR: attribute verification of </usr/local/man/man3/Tcl_Seek.3> failed
pathname does not exist
There are lots of errors like this. I tried to troubleshoot it by googling but could not find anything about it. I am stuck with my development because of this.
Try building Tcl/Tk and Expect from the source. Here is the instruction - How to Compile Tcl. Expect download - Obtaining Expect for UNIX. That worked for me on Solaris 10 and I did not hit any serious bumps.
For those who want to install tcl please refer this URL. it has got steps to do that. URL: http://www.wellho.net/mouth/1174_Installing-Tcl-and-Expect-on-Solaris-10-a-checklist.html